Syngnathus scovelli (Gulf pipefish): 125981917
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Entry
125981917 CDS
T08785
Symbol
zbtb16a
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125981917 (zbtb16a)
04121 Ubiquitin system [BR:
sscv04121
]
125981917 (zbtb16a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125981917 (zbtb16a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125981917 (zbtb16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_8
Endonuclease_7
zf-C2H2_16
MIX
zf-C2H2_REST
zf-C2H2_11
zf_UBZ
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
125981917
NCBI-ProteinID:
XP_049597955
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Position
15:5813394..5880111
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AA seq
654 aa
AA seq
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MDLTKMGTIQLQNPNHPTALLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRSSQHYTLDFLSPKTFQQILDYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDENDAEAGANDGSAEEDDERKGQNGVKSAQKHSMESLYLSGAMSSMVDQSPS
VSTSFGVSNLSPTKAAVDSLMSIGQSLLQQGFGGQHANTHHLVSEIKTEMMQVDAGGNGH
ESTESGASSNGERSGEERNRDGPGTPTRSSVITSARELHYVRDDGMGDPQADVGHMGLEA
MAGMAEKHLASLYSLPVNHKGEHAIMSMPVSMASALPMSPALAMSVDFSAYGGLLPQSFI
QREFFSKLGELAVGMKPDGRSQHERCNVCGAELPDNDAVEQHRKMHSGMKTYGCELCGKS
FLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQTEESLEAHRQIHTGSDMAIFCLLCGKRFQ
TQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHPYECEFCGSCFRDES
TLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIK
HLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEDIPPDWRIEKTYLYLCYV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacaaagatgggtacgatccagctgcagaaccccaaccaccccacggcgctc
ctgcacaaggccaaccagatgcgcctggcggggacgctgtgcgacgtggtcatcatggtg
gacagccaggagttccacgcccaccggacggtgttggcctgcaccagcaaaatgtttgag
atcctcttccaccgcagcagccagcattacaccctggactttctctcgccaaagaccttc
caacagattttggactacgcttacactgccacgctccaggccaaagtggaggacttggac
gatttactgtacgcggcggagatcctggagatcgagtatttggaggagcaatgcctcaag
atcctggagaccatccagtcgtcggacgagaacgacgccgaggccggcgccaacgacggc
agcgccgaggaggacgacgagcgcaaaggccagaacggggtcaagagcgcccaaaagcat
tccatggagagtctctatctgtcgggtgccatgtccagcatggtggaccagagtccctcg
gtctccacatccttcggcgtctccaacctgagccccaccaaagccgcggtggacagcctg
atgagcatcgggcagagcctgcttcagcaaggcttcgggggccagcacgccaacacccac
cacctggtgagcgagatcaagacggaaatgatgcaggtggatgcgggcggcaacggccac
gaaagcaccgagtcgggcgcctccagcaacggcgagcgaagcggcgaggagcgcaaccga
gacgggccgggcacgcccaccaggagcagcgtgatcaccagcgcccgcgagctgcactac
gtccgcgacgacggcatgggcgaccctcaagccgacgtgggccatatggggctagaagcc
atggccgggatggccgagaagcacctggcgtccctctactcgctcccggtcaaccacaaa
ggcgagcacgccatcatgtccatgccagtctccatggcctcggccctgcccatgtcgccg
gccttggccatgtcggtggacttcagcgcctacggcggcctgctcccccagagcttcatc
cagagggagttcttcagcaagctgggcgagttggcggtgggcatgaaacccgacggcagg
agccagcacgaacgctgcaacgtctgcggtgcggaacttcccgataacgacgccgtggag
cagcacaggaagatgcacagcggaatgaagacctacggctgcgagctgtgcgggaagagc
ttcctggacagtctccgtctccgcatgcatctgctctctcattcagctggcgagaaggcc
atcgtctgcgaccagtgcggcgctcaattccagacggaagagtccctggaggctcaccgg
cagatccacaccggctccgacatggccatcttctgcctgctgtgcggcaaacgtttccag
acgcagacggcgttacagcagcacatggaggtccacgccggcgtgcgtagctacatctgc
agcgaatgcaaccgaaccttccccagccacacggcgctcaagcgccacctgcgctcgcat
acagccggggaccacccgtacgaatgcgagttctgcgggagctgtttccgcgacgagagc
acgctgaagggccacaagcgcatccacacgggggagaagccctacgaatgtaatggctgc
ggcaagaagttcagcctcaagcaccagctggagacccactaccgcgtgcacacaggtgag
aagccattcgagtgcaagctgtgccaccaacgatccagggactactcggccatgatcaag
cacctgcgcacccacaacggcgcctcgccctaccaatgcaccatctgcctggagtactgc
cccagcctgtcggccatgcagaagcacatgaagggccacaagcccgaagacatccctcca
gactggcgcatcgagaagacctacctgtacctctgctacgtctaa
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