Syngnathus scovelli (Gulf pipefish): 125981925
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Entry
125981925 CDS
T08785
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125981925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125981925
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sscv04031
]
125981925
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
125981925
GTP-binding proteins [BR:
sscv04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
125981925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
GTP_EFTU
TniB
Motif
Other DBs
NCBI-GeneID:
125981925
NCBI-ProteinID:
XP_049597967
LinkDB
All DBs
Position
15:5965735..5968942
Genome browser
AA seq
290 aa
AA seq
DB search
MGTNVSKMPIVLKEKLEIFDDSECVTSADLGCVEMRGFTVNANVNGADEGERMLVYASSS
KWGLAFTHIELSASRLDMDTIWLYQFRLIVIGDSTVGKSCLIRRFTEGHFAHVSDPTVGV
DFFSRLLEIEPGKRVKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHSW
LEEAQSHVQPHSIVFLLVGHKCDLEPQRQVSRQEAEKLAAAFGMNYVETSARDAINVETA
FMDLTRQIFELVRGGDIKIQDGWEGVKSGLVPNTVHSSEEVTKAGRQCLC
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaatgtgagtaaaatgcctatagttttaaaggaaaaattggaaatattcgac
gacagcgaatgcgtcacttccgccgatttgggctgcgtcgaaatgcgtggatttacggta
aatgcaaatgtaaacggtgctgatgagggcgagcggatgctggtgtatgcatcatcttcg
aaatggggcttggcttttacgcatattgagctctcggcttcaagacttgacatggacaca
atttggctttaccagttccgtctgatcgtgatcggcgactccacggtgggcaagtcgtgt
ttgatccgcaggttcacagagggccactttgcccacgtgtcggacccaactgtgggtgtg
gacttcttctcgcgcctgctagagattgagccaggcaagagggtcaagctccaaatttgg
gacactgcgggccaggagaggttcaggtccatcaccagagcatactaccgcaactcagtg
ggcgggctcctgctcttcgacatcaccaaccgccgctcattccagaacgtgcacagctgg
ctggaggaggcgcagagtcacgtccagccgcatagcattgtcttccttctggtgggtcac
aagtgcgacctcgagccccagcgtcaggtgagcaggcaggaggctgagaagctggcggca
gccttcgggatgaactacgtggagacgtcggcacgtgacgccatcaacgtggagacggca
ttcatggatctgacgaggcagatcttcgagctagtgcgtggcggcgatatcaagatccag
gacggctgggagggcgtcaagagcggactggtccccaacacggtacactcctcagaggag
gtcaccaaggcaggtcgccagtgtctctgctga
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integrated database retrieval system
