Syngnathus scovelli (Gulf pipefish): 125981969
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Entry
125981969 CDS
T08785
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125981969 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125981969 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125981969 (rars1)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125981969 (rars1)
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
125981969 (rars1)
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125981969 (rars1)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125981969 (rars1)
Prokaryotic type
Other AARSs
125981969 (rars1)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125981969 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1g
CCDC90-like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
125981969
NCBI-ProteinID:
XP_049598038
LinkDB
All DBs
Position
15:90306..94753
Genome browser
AA seq
661 aa
AA seq
DB search
MDGDCVNEYTRRLRKQECEIQSLSAELESLKNPQSSSPSCRLEELREENSRLQYRLNILK
RSLQEETPCCGTAMININQRLQEIFGQAIRASCPELDRPPLSVTPNQQAKFGDYQCNSAM
AMAQLLKAKGLKVNPKEIAEKIIQNLPQNELIQKTEIAGPGFINVHLKRSFVSGLLRDLL
LNGVQPPRLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVG
DWGTQFGMLIAHLQDQFPNYLAVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVRLQS
KEADFIKGWNLICDVSRREFQKVYDCLDVDIIERGESFYQDLMTKVVKEFDEKGLTEMDE
GRKIIFAPGQSIPLTVVKSDGGYTYDTSDLAALRQRIFHEKADIIIYVTDSGQAPHFQLV
FAAAKMIGWYDPQVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKE
KERDKVLTPEELRKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFT
RIRSIARLANLDEATLRKAAESTEVLLDHEKEWKLGKCILRFPEILQKILDDLLLHPLCD
YLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAKGFHILGINPVQR
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacggagactgtgtgaacgaatatacgaggcggctgcggaagcaggaatgcgagatc
caaagtctctccgctgagctggagagcctgaagaacccgcagagctcaagtccgtcttgt
cgtctggaggagctgcgagaggagaacagcaggctgcaatatcgcctcaacatcctcaaa
aggagtctgcaggaggagaccccctgctgcgggacggccatgattaacatcaaccagcgg
ctgcaggagatttttggccaggccatccgggcttcctgccctgagctggacaggccgccg
ctctccgtcacgcccaaccagcaggccaagtttggagactaccagtgcaacagcgccatg
gccatggcacagctgttgaaagcaaaaggcctaaaagtcaacccgaaggaaattgccgag
aaaatcattcagaaccttccgcaaaacgagcttatccagaagacagaaatcgcaggacca
ggcttcatcaacgtccacctgaagcgctcgtttgtgtccgggctgttgcgcgacctgctg
ctcaacggcgtgcagccgcctcggctcgcctccaggaagcgggtggtggtggacttctcg
tcgcccaacatcgccaaggagatgcacgtgggccacctgcgctccaccatcatcggcgac
agcatgtgtcgactctttgagttcctgggctacgacgtgctcaggttgaaccacgtgggg
gactggggcacgcagttcggcatgctcatcgcccacctgcaggatcaattcccaaactac
ctggcggtgtcgccccccatcggggacctgcaggccttctacaaagagtccaagaagcgt
tttgatgaggaggaggatttcaagaagcgggcgtaccagtgcgtggtccgcctgcagagt
aaagaagccgacttcatcaaaggctggaatctcatctgcgacgtctccaggagagagttc
cagaaggtttacgactgcctggacgtggacatcatcgagcggggcgagtccttctatcag
gacttgatgacgaaggtggtgaaggagtttgacgagaaaggtctgacagagatggacgag
ggtcgcaagatcatcttcgcccccggtcagtccatcccgctcaccgtcgtcaagtcggac
ggcggttacacgtacgacacgtcggacctggccgccttgcgccagcgcattttccacgag
aaagccgacatcatcatttacgtgacggacagcgggcaggccccacacttccagttggtg
tttgccgccgccaagatgatcggatggtatgacccccaggtgaccagggtggagcacgcc
ggatttggagtggtgctaggcgaagacaagaagaagtttaaaactcgctcaggagacacg
gtgaggctgatggacctgctggatgaaggactgaagaggtccatggacaaactcaaggag
aaagagcgagacaaggtcctgacgccggaggagctgcggaaggcccagcgctcggtggcg
ttcggctgcatcaagtacgccgacctgtcgcacaaccgcatcaacgactacgtcttctcc
ttcgacaagatgctggacgaccgcggcaacacggccgcgtatctcctctacgccttcacg
cgcatccggtccatcgcccgcctggccaatctagacgaggcgaccctcaggaaggctgcc
gagagcacggaggtgctcctggaccacgagaaggagtggaagttgggcaagtgcatcctg
cgcttccccgagatcctgcagaagattctggacgacttgctgctgcacccgctgtgcgat
tacctctatgagctggccaccaccttcaccgagttctacgacagctgctactgcgtggag
aaggaccgacagacgggtgaagtggtgaaggtgaacatgtggcggatgctgctgtgcgaa
gccacggcagccgttatggccaaaggcttccacattctgggtatcaacccagtgcagagg
atgtga
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