Syngnathus scovelli (Gulf pipefish): 125981989
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Entry
125981989 CDS
T08785
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125981989 (tbc1d8b)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125981989 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
125981989 (tbc1d8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
125981989
NCBI-ProteinID:
XP_049598067
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Position
15:complement(6497660..6506447)
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AA seq
1127 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKDNEYFVLQRRRGYGEGAGGLTGLLVGTLDTVLDSTSKVA
PFRILHHTSDSQVYWSIACGVTKEEIVQHWDWLLQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKTSHKLEDDPEKFREAYLRFENWFALPPEEKLVTYYACSYWKGKVPCQGWLYLS
TNFLCFYSYLLGAEVKLVISWDEIWRLEKTSNVILTESIHVMAHGEDHYFSMLLHLNETF
VIMEQLADYSIKRLFDKEAFEKERALSDPLQITKRGLEAHAKSEQFRTFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHIIIPMREVVNVEKPDTSSRALTV
YVRGKRALRFTEVRDYQRLATSIRSRCGISASPQHSASAEVIRGECQSLINHFEDNPDDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYTELVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVENMTDLSLFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEALISCHDDAEAVTILNKFFDSVTNKD
SPLPPTVQQAPVNNNDKSTRLNVDISELIRESYEKYGSIRSEDVESSRKRNRLFVIQTLE
DTTKQNVIRVVSQEVKFTPAQLDELYNLFKRQHFLSCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFSVLFSLLEPWAFCTNKSTLSLWVFRLIDENQDGLVNFKEFCCALDNLYCGSFTN
KLKFLFKLHLPPAFTGSPLHEQEERLPSFFATTGGSPHLSRFPDFDLPEDGVIKRSPERG
RGKVDLQAYLKQWQNEILRKEETIKDLPRINQGQFIQFSKTLYNIFHGDPEEESLYRAVA
HVTSLLLRMEEVGRRLQEPSSPAASSKPTPPDGEDQAPLTSESSDTPSPQEVGPEVPGED
WSFSFEQVLASLLNEPEIVSFFDKHVDIQSKMTQAQVAQLKLAGNSK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacctgaagagatactgctgaaaaacgcctttaaactgtgggtcaccgag
aaggataatgagtattttgtgcttcaaaggaggcgagggtacggtgagggtgcaggcggc
ttgacaggtctccttgtaggaacgctggacacagtactggactccacatccaaagtggct
cctttccgaatactgcaccacacgtcggattcacaagtgtattggtcgatagcatgcggg
gtcacaaaggaggaaatagtccagcactgggattggctgctgcagaatatcatgaggacc
ctctcggttttcgattccagcgaggacatcactagctttgtgcagggcaaaatcaggggt
ctgattgctgaagaaggaaagacgtcccacaagctggaggacgatcctgagaagttcaga
gaggcatacttgaggttcgagaactggtttgcgctaccgccggaggagaagctggtcacg
tattatgcctgtagttactggaaaggcaaagtcccctgccagggttggctctacctcagc
accaacttcctctgcttttattcctacctgctgggagctgaggtgaaactggtcatctcc
tgggatgagatctggaggttggagaaaacatcaaacgtcatcctgactgagagcatccac
gtcatggctcacggggaggatcactatttctccatgctgctgcacctcaacgaaacattt
gtcatcatggagcagctagctgactactccattaagcgcctttttgataaagaggccttt
gaaaaagagagagcactctcagacccactgcaaataaccaagagaggcctagaggctcac
gcaaaaagtgagcagttccggacatttttcaggcttcccaaagaggaaaatctgttagaa
gtgcacgagagtttcctgtgggtgcctttcagccattttaatacacttggcaagatctgc
ctatctgagaactacttgtgttttgccagtcaggacgggagccaatgtcacatcatcatt
ccaatgcgcgaggtcgtaaatgttgagaagccagataccagcagccgtgctttaacagtg
tatgtgcgtgggaaaagagcactccgtttcaccgaggtgcgggactaccaacgtctggcg
acaagtattcgcagccggtgtgggattagtgctagcccgcagcactcggcatcagcggag
gtcatccgaggcgaatgtcagtcgctcatcaaccactttgaggacaacccagacgacgtg
acacttatggtgggccagaaagacagcagcaaggcagtaagcaccgaggcgctcatgact
gttttccacccccaggatgttgaaaaccttgaccctaaaatgcttaaggagaagatgaag
gaacagtcttggaacatccatttttccgaatatggccgcggtacaagtatgttcttcacc
aggaagacgcgtgacttgattgtccgtggcgttcccgaagccttacgaggagagctgtgg
atgcttttctcgggagccgtaaacgacatggcgactcatcctggatactatacggagctg
gtggagcagtctctcggcacgagcacgttggctacggatgagattgagcgagaccttcat
cgctctctgccagagcatcccgcctttcagagtgatacgggaatctccgccctccgccga
gtcctcaccgcatacgcgtatcgaaaccctaaaattggctactgccaggccatgaacatt
ctgacctcagtcttgctgctctatgccaaagaggaggaggccttttggctattagttgct
gtctgcgagaggatgctaccagattattttaaccggagaattataggggctttggtcgac
caggctgttttcgaggatctgattcgagagaacctcccccagctggtggagaacatgaca
gacctgagtctcttctcatccgtttcattgtcctggttcctcaccctcttcatcagcgtg
ctgcccatcgaaagcgccgtgaacgtggtggactgctttttctacgacggcatcaaagcc
attctgcagctcggcctggccgtgctggattacaacatggaagctctgatcagctgccat
gatgacgctgaagctgtcaccatcctcaacaaattttttgatagtgtgacaaacaaagac
agcccgttgccaccaactgtccagcaagcccctgtaaacaacaacgataaatcgacccgc
ttaaatgtggacatcagtgaactgatccgagaatcttatgagaaatatggcagcattcgc
tcagaggacgttgagagttcacgaaaaagaaacaggctttttgtaatccaaacactggag
gacacaacaaagcagaatgttattcgtgtcgtgtcccaagaagtcaaatttactcctgcc
cagcttgacgagctttacaacttgttcaaaaggcagcattttcttagctgctactggaca
atgaagagtccggccctgcttcaccacgatccgagtctagcctacttggagcagtaccag
ctgggcttccaacagttcagcgtgctcttctcgctgctggagccttgggctttttgcacc
aacaagagcactctttctctctgggttttccgattaatcgacgagaaccaagatggcttg
gtcaactttaaagagttctgttgtgctcttgataatctatactgtggatctttcacaaat
aaattgaagttcctcttcaagctgcatctaccgccagctttcacaggtagtcctttgcac
gaacaggaagaaagactcccaagctttttcgcaacgacaggaggctctcctcacttgagt
agatttcctgattttgatcttccagaagatggcgtgattaagagaagtcctgaacgaggt
cgagggaaagtggatctgcaggcctacttgaaacaatggcagaatgaaatacttaggaaa
gaggaaactattaaggacctgcctagaattaatcagggtcagttcattcagttctccaag
accttgtacaacattttccatggcgatccagaagaggagtctctgtaccgcgcagtagcc
cacgtaaccagcctccttctgaggatggaggaggtgggtcggaggctgcaggagccaagc
agcccggccgcatcctcaaagcccactcctccggacggggaagaccaagctcctctcaca
tccgaaagctcagacacccccagcccccaggaagttgggcccgaggtccctggggaggac
tggtccttttcgttcgagcaagtcctcgcgtcgctgctcaacgagcccgaaatagtcagc
ttctttgacaaacacgttgacattcagagtaaaatgacgcaagctcaagtggcccagctg
aagctagcaggaaatagcaagtaa
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