Syngnathus scovelli (Gulf pipefish): 125982003
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Entry
125982003 CDS
T08785
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00533
Glycosaminoglycan biosynthesis - keratan sulfate
sscv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sscv01100
Metabolic pathways
Module
sscv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
125982003
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
125982003
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125982003
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
125982003
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
125982003
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
125982003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
125982003
NCBI-ProteinID:
XP_049598091
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MGFCSAACCKLSRRVKYLFLLLLPLSVLAWICLFSGGSVKSFTVFSAATQALIKKENTQD
LANLGTSVAVRLMTPTPRTECPKKSPLLQGAVKLNFEPSLKVKDVEGENKRVVEGRYQPL
SCTARQSVAILIPHRNRERHLLYLLHHLHPFLQRQQLHYAVYVIQQAGDATFNRAKLLNV
GYLEALKDYTWDCFIFHDVDLVPENDRNLYVCDSQPKHLVVGRNATGYKLHYKGYFGGVS
AMSREQFGKVNGFANTYWGWGGEDDDLRIRVELQKMKIVRPPADIARYTMVFHKRDSGNE
VNKDRMKLLRRTPLVWKKDGLNSCKYQILSVERLPLYINVTVDLGKP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttgttcggctgcttgttgcaagttgtcgcgcagggtgaagtaccttttttta
ctgcttctccctctttctgtgctggcatggatttgcctattctcgggtggcagtgtgaaa
tctttcacggttttctcggcggcaacacaagctctcattaaaaaagagaacacgcaggac
ctggcaaacttggggacatcggtggcggttcgcttaatgacaccaacgccgagaacagaa
tgtccgaagaagtcgccgcttctacaaggagcggtgaagctgaactttgagccctctctg
aaagtgaaagacgtggagggtgagaacaagcgagtggtggaaggccggtatcagcctttg
tcgtgcacggccagacagagcgtggccatcctcattccccatcgcaaccgagagcgacat
ctcctctacttgctgcaccacctgcaccccttcctgcaaaggcaacaactccactatgct
gtttatgtcatccagcaggccggtgatgccacttttaaccgtgccaaactactgaatgtg
ggttacttggaagcactgaaagactacacttgggactgtttcattttccatgatgtggac
ttggttcctgaaaatgatcgcaatctctacgtctgtgattcacaacccaaacatcttgta
gttggccggaatgccacgggatacaagctgcactataaaggctactttggaggagtctcg
gccatgagcagagagcaatttggcaaagtgaatggatttgcaaacacctactggggttgg
ggtggagaagacgatgacctacgcattagggtggagctgcaaaaaatgaagattgtgcga
ccacccgctgacatcgcacgctacacgatggtgttccacaaacgagacagcggtaatgaa
gtcaacaaagacaggatgaagctgttaagacggacgccactagtttggaaaaaagatgga
ctgaacagctgcaaatatcagatattatcagtggagaggttgccgctctacatcaatgtg
accgtagacctcgggaagccatag
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