Syngnathus scovelli (Gulf pipefish): 125982037
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Entry
125982037 CDS
T08785
Symbol
ntm
Name
(RefSeq) neurotrimin isoform X1
KO
K06773
opioid binding protein/cell adhesion molecule-like
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125982037 (ntm)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
IgLON family
125982037 (ntm)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
Izumo-Ig
V-set_CD47
Ig_6
Adeno_E3_CR1
C2-set_2
DUF3085
Motif
Other DBs
NCBI-GeneID:
125982037
NCBI-ProteinID:
XP_049598150
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All DBs
Position
15:580159..613796
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AA seq
374 aa
AA seq
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MGTRWPPHHDGPEAEPSRLRMKASIHFTFHSLANIIPGHDEAKKGLPAVHSQGQSQYDKN
LMDNITVRQGETVTLRCAQGEIVTHTAWLNRSSILYAGDEKWSVDPRVSLVTLNQEEFTI
KIENVDMTDEGQYVCAVQTSRRPTTNVVHVLVQVPPKIVNLSRDMVVNEGSNVSVLCQAN
GKPEPSISWKLISPSADLETNSEYLEIPSISRHRAGTYECRAVNDIDTDTQTLDVTVNYA
PTVSEGRDIGVRLGQRGVLECEADAVPEADFEWFKNDRRFLNGFDGMEIVNTGSLSKLTF
LNVSDGDYGNYTCVAVNKLGSSNTSFIMYVAIEPTSSTLLQGPRAVQDGSGSALGVHIDI
SLLSIVFLLFLLKL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccagatggcctccccaccacgatggacctgaggcagaaccctcccgtctgaga
atgaaagcatccattcatttcacgttccattcattagccaatatcataccaggccacgac
gaagccaagaaaggcttgcccgccgtccacagtcaaggccagtctcaatatgacaaaaat
ctcatggacaatattaccgtcagacaaggagaaactgtcactctcaggtgtgcacagggg
gaaattgtcacacacacggcctggctaaatcgctcaagtatactatatgccggagatgaa
aaatggtctgtggatcccagggtgagtctggtgacacttaatcaagaggagtttaccatc
aagattgaaaatgtggacatgacagatgagggccagtacgtctgtgctgtccagaccagc
aggcgacctacaaccaatgttgtgcacgtccttgttcaagtcccaccgaaaatcgtcaat
ctatcaagagatatggtggtgaacgaaggctccaatgtcagcgtgctgtgccaagccaat
gggaaacccgaaccttccataagctggaagctcatctcaccttcagccgacctggaaaca
aacagcgagtacctggaaattccatccatcagcagacacagagcgggaacgtacgaatgc
agagctgtcaacgacatcgacaccgatacccaaacgctagacgtcaccgtcaactatgct
cccactgtgtctgagggaagagatattggcgttagactgggacaaagaggcgtgctggag
tgtgaggctgatgccgtgcctgaagctgactttgagtggtttaaaaatgacagaagattc
ctcaacggctttgatggtatggagatcgtaaacaccggctcgctctccaaactgacattt
ttgaatgtttccgacggggactacggcaattacacctgtgttgccgtcaacaaacttggg
agttccaatacaagtttcattatgtacgtggcaattgaacccactagctcaacactattg
caaggaccgagagcagttcaggatggcagcggatcggcattgggcgtgcacatagacatc
tctctcctctccatagtgtttctgctctttctgctcaaactttga
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