Syngnathus scovelli (Gulf pipefish): 125982155
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Entry
125982155 CDS
T08785
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125982155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125982155
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125982155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
125982155
NCBI-ProteinID:
XP_049598393
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All DBs
Position
15:8630951..8838026
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AA seq
436 aa
AA seq
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MEGDGSQTTSGSLSDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVEKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFDSEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVVAARGSGRGARGRGGYLAYPQSAGPGLPDYGFYSAPGDQRGGP
CSFADYASLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGANPSRPGGFHGTNSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFGPSITGDSVQQRCHEETVHPPFHPPSVSKAC
NGCSSSAAEFFFDRAV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaaaccacatccggaagcctaagcgactcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaatttggagaaataagagaatgtatggtgatgcgagaccccacgacgaaacgc
tcaagaggatttgggtttgtgacatttacagatgctgccagcgtagaaaaagtcttagct
cagcaacaccacgaattagactcaaaaacgattgatcctaaggttgcctttccacgtcgc
gcccagcctaagatggtcacaagaacgaagaaaatattcgtgggtggcctttcagccaat
acagtagtggaagatgtgaagcagtattttgaacagtttgggaaggttgatgacgccatg
cttatgtttgataagactacaaacagacatagaggatttggtttcataacatttgacagt
gaagacatcgttgagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttccctcctggaacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgctagggatgggcatgctgagttacccc
aatatcgtggctacatatggccgtggatacactggattcgcacccagctacagctaccag
ttccctggcttcccagcgacggcatacggaccggtggcggcggcggcggtcgtagcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcgca
gggccaggcctccccgattatgggttttactcggcacccggtgaccaaaggggggggccc
tgctcctttgctgattatgcctccctggggccccaggcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcagtttaag
aacccaggcgccaacccgtcaagacccggaggtttccacggcaccaacagcccagggcct
gtggccgacctttacggacccagcagccaggattcggctgtgggcaactacatcagcgct
gccagccctcagcctggttccgggttcggccccagcatcaccggcgactcagttcagcag
aggtgtcatgaagagacggtccacccccctttccaccccccaagtgtgtcaaaggcctgt
aatggttgttcctcatcggcagcggaatttttttttgacagggctgtgtaa
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