Syngnathus scovelli (Gulf pipefish): 125982188
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Entry
125982188 CDS
T08785
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4 isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125982188
04082 Neuroactive ligand signaling
125982188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125982188
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125982188
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125982188
NCBI-ProteinID:
XP_049598466
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Position
15:complement(2142979..2221537)
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AA seq
511 aa
AA seq
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MLGRQEDKLCGIFSALAALSFACFIQSSTGSTGMSVAKTTVDKLLKGYDIRLRPDFGGAP
VIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELNLNLTLDNRVADQLWLPD
TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIVFFWEGGDSAVTGVDKLELPQFSIVGIRLVSKEVRFTTGSYPRLSLSFRIK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKI
PYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKINERLNKVNNERTRYEEKR
LREQDSISVPFQSNTFRSFTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGSS
VSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPNL
SDVSTIDKWSRVIFPITFGFFNLIYWLYYVN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgtcaagaagataaattatgtggaattttctctgctctggcggctttgtcc
ttcgcatgctttattcaaagctccactggaagcaccggaatgtctgtggccaagactacc
gtggacaagttgctgaaggggtacgacatccgtttaaggcctgattttggaggtgctcca
gtcatagtcgggatgagcatcaacatagcaagcatcgattccatctcagaagtaaacatg
gactataccatcacaatgtatttccagcaaagttggcgagataaacgtttggcctatggt
gaattgaacctcaacctgactttggataaccgtgtggcggatcagctttggctcccagac
acttacttcctgaacgacaagaagtcctttcttcacggagtgacggttaaaaaccgtatg
atccgacttcaccctgacgggaccgtcttgtacgggctgagaataaccaccactgctgct
tgcatgatggacctgaggagataccctcttgatgaacagaactgcaccttggaaattgaa
agctacggatacaccacagatgatattgtgttcttctgggaaggaggggacagcgccgtg
acgggtgtggacaagttagagttacctcagttctccattgtgggcattcgattggtttcc
aaggaagtaaggtttactacaggttcttatccgaggctttcgctgagtttcaggattaag
aggaacattggatatttcatcttgcagacatacatgccttccattttgatcaccattctg
tcctgggtctctttctggatcaattatgatgcctctgcagctcgggtggccctgggtgtg
acaacggtgctcaccatgacgacaattaacacccaccttcgggagactctcccaaagatc
ccctacgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctggcc
ctgctggaatatgcctttgtaaattatgtgttctttggccggggcccggcgcaacagaag
aaaatcaatgagaggctgaataaagtcaacaatgagcgcacacgatacgaagagaagcgc
ctaagggaacaggactccatttccgtgccgtttcaaagcaacaccttcaggtcatttaca
cagcgaagaaatctgtatctcgaggaacaaagaaaagttggggtggatgcgtacggcaac
attctcctcaccactctggaaatgaacaacgaggtgatgccttctgacgtggggagcagc
gttagtgactctcggaattcagtcatgtcctttgacagctccggggtccaattcaggaag
cccatggcgccccgagatggcttcagccaccactcgctggatcggagcgctatgcggagc
cgggccaactgccgactacggcggcgttcgtccaagctcaagttgaaaatcccaaacctg
tcagatgtaagcaccattgacaagtggtcccgggtcatattccctatcacctttggattt
ttcaacctaatctattggttgtactatgtgaattga
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