Syngnathus scovelli (Gulf pipefish): 125982209
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Entry
125982209 CDS
T08785
Symbol
mcf2a
Name
(RefSeq) proto-oncogene DBL
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125982209 (mcf2a)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125982209 (mcf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
PH
CRAL_TRIO_2
Spectrin
Spectrin_SESTD1
CRAL_TRIO
DUF4172
Motif
Other DBs
NCBI-GeneID:
125982209
NCBI-ProteinID:
XP_049598549
LinkDB
All DBs
Position
1:complement(22871494..22885300)
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AA seq
1006 aa
AA seq
DB search
MSRYHNMAETCCRRGLAKIRTSPASFPGNLHLVLVLRPTSFFHRTVTDIGFRFTQEDFML
KMPVVMLSSVTDLLKYINENQLTSEFGGTLDYCHSDWIVLRTAIESFAVTVKDVAHMLQA
FGTELAETAMPSEGDAIQSLLDSHNEKYRKLKEAIRSLSKEGQHLLSSLETTTTRDNNDP
HWDVQLDWETVQRLLTQLRDMELAFDGYFEKHRLKLHQYLQLLTYEQSFQEMESCLSGVT
SQQSQLSTTVDTLAQAEQALKQLETLETLAQEAVSRSQIVILRGHQLSAGHHYATALIMQ
RCNELRHHCDSLNAALGNKRCHLLQAQQLLLSLDQAQSWCDDGAYMLANQLVEKFHSKEG
AQTALKAIESLLEGSPSIMTSAPEVLALEYEAVITPQLQEKISKTFEKHAAVQLMIQNRR
TDLRKLADKHVRPVQLVAPRAENPPRSKSPIFSPKHADGLKFTFDLPLPGKRASRKGPNA
RKIEVIHDYQESRSCVLYGVEGEDSPDVLKRHVMRELIETERIYVEELLSVLLGYEVEMD
NPLLADLLPPVLHAKRGVLFGNMPDIYNFHSSMFLQDLEGCLDTPEGVGLCFLARKENFQ
MYECYCQNKPRSDALWRQFSDCAFFQECQKKLGHKLGLDSYLLKPVQRLTKYQLLLKELL
KHSTDCKGSSELQGALTAMLDLLKSVNDSMHQISITGYEGDICELGRVLMQGSFSVWISH
KKGSTRMKELARFKPMQRHLFLYESVLLFCKKREEHGEGCDKTPSYGFKHCIKMTAVGIT
ENVKGDPRKFEIWYSGREEVYVVQAPSVAVKMSWLSELRRILTNQQKLLRDEIHQNGQPV
EHMHLSPPPCESKQERASLSSEDTESGKSSPDAQRRAPKYQLNRRSWPGAHHHSVTICEG
LDDTNVGRHAFHQPDTQMVKLSRGRYRALADCLQNGPDSVLIKCGDVIQLMCEDNKGRWL
VKNLSRHQDGFIASASLQVTIRGSSRAGSSRLRETGNVRTRKLSSP
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctatcacaacatggctgagacatgttgccggagaggactcgcaaagattcgg
accagcccggcctcctttccggggaacctccacctggtcctggtgctccgacccaccagt
tttttccaccgcaccgtcactgacatcggctttcgcttcacccaggaggacttcatgctg
aagatgcctgtggtgatgctgagctccgtcacagacctgctgaagtacatcaatgaaaac
caactgacgtcagagttcggaggcaccctggactactgtcacagcgactggattgtttta
agaacggccattgaaagttttgccgtcacagtgaaagacgttgcgcacatgctgcaggcc
tttggcactgaactggccgagaccgccatgcctagtgagggtgatgccattcagagtctc
ctggactctcacaatgaaaaatacagaaagcttaaggaggccattcgatctttgtcaaaa
gagggtcaacatctgttgtcaagcctggagaccaccaccaccagggacaacaatgaccct
cactgggatgtccagctggactgggagacggttcaacggctcctgactcaactccgagac
atggaattggcctttgatggctactttgagaagcaccgtctgaaactgcatcagtacctg
cagctgctcacgtatgagcaaagctttcaagagatggagtcgtgcctgtctggcgtgaca
tctcagcagagccagctgtccacgacggtagacacgctggctcaagccgagcaggctctc
aaacagctggagactttggaaacacttgctcaggaagccgtgtcacgctcccagatcgtc
atccttcgtggccaccagctgtcggcgggacaccactatgccacggctctaatcatgcaa
cgctgcaacgagctgcggcatcactgtgacagcctcaatgctgctttggggaacaaacgc
tgtcatctcctgcaagcgcagcagctcctactgtctctggaccaggcccagtcctggtgt
gacgatggagcctatatgctggccaatcaacttgtggagaagttccactccaaggaggga
gcacagactgctttgaaggccatcgagagcttgctggagggttcgccctccataatgaca
tctgctcctgaagttctagctttggagtatgaggctgtcatcactcctcagctgcaggag
aagataagtaaaacatttgagaagcacgcagcggtgcaactgatgatccagaaccgacgg
accgatctgaggaagctggccgacaaacacgtccgaccggtccagctggtggccccccgt
gctgagaacccacctcgctcaaaatcaccaattttctcccccaagcacgctgacggtttg
aaattcacatttgatctccctcttcctggaaagagggcatcccgaaaaggccccaatgct
cgcaagatcgaggtcattcatgactaccaggagagccgcagttgtgtgttgtacggcgtg
gaaggagaggacagcccggatgtcctcaagcgtcacgtgatgagagagctcattgagaca
gagaggatctatgtggaggagctgctgtcggtccttctcggctatgaggtagagatggac
aacccgcttctggctgacctcctgccgcccgtcctgcacgccaagagaggagtcctcttt
ggaaacatgcccgacatctacaactttcacagcagcatgtttctccaggaccttgaggga
tgcctggacactcccgaaggtgtgggactttgctttcttgccaggaaggagaacttccaa
atgtacgaatgctactgtcagaacaagccacgttctgacgctctgtggcggcagttctcg
gattgtgccttctttcaggagtgtcagaagaagctaggccacaaattgggcctggattca
tacctgctaaaaccagttcaacgcctcaccaagtatcaactgctgcttaaggagctcctg
aaacatagcaccgactgcaagggatcatctgaactacagggagcgctaacagccatgctg
gacctgctgaaatccgttaatgattccatgcatcagatttctatcacaggatatgagggg
gacatttgcgagctgggccgcgtgttgatgcagggctctttcagtgtgtggatcagccac
aagaaagggtccacgcgcatgaaggagctggcccgcttcaagcccatgcagcgccatctg
ttcctctacgagagcgtgctgctcttttgcaagaagagggaggagcatggggaaggttgc
gacaaaacgccctcgtacggcttcaagcattgcatcaagatgactgctgtggggatcaca
gagaacgttaaaggagatcctaggaagtttgagatctggtacagtggcagggaggaggtg
tacgtggttcaggcccccagcgtggcagtgaagatgtcctggctcagcgagctgcgtcgc
atcttaactaatcagcagaagttactgcgagatgagattcatcaaaatggacaaccagta
gagcacatgcatctttctccaccaccatgtgagagtaagcaagagagggcgtcgctcagt
tcggaggacaccgagtcggggaagagcagcccggacgcccagcggcgtgcccccaaatac
cagctcaaccgcaggagttggccgggagctcatcatcactcggtaaccatctgtgagggt
ctggatgacacgaatgtcggccggcatgctttccaccagcctgacacgcaaatggtgaaa
ctgtctcgaggcagatatcgggccttggcggactgcctacaaaacggaccggacagcgtc
ctcatcaaatgcggcgatgtcatccagctgatgtgtgaagacaacaaaggccgctggctg
gtgaagaatttgagtcgccaccaagatggctttattgcttctgccagcctgcaagtgacc
ataagagggagcagtcgagcaggctcttccagactcagggaaacaggcaacgtcaggaca
agaaagctcagttctccatag
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