Syngnathus scovelli (Gulf pipefish): 125982270
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Entry
125982270 CDS
T08785
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125982270 (supt6h)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125982270 (supt6h)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125982270 (supt6h)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125982270 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
125982270
NCBI-ProteinID:
XP_049598650
LinkDB
All DBs
Position
15:complement(3699220..3709450)
Genome browser
AA seq
1739 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKELKPKKTQRFMEDDDEEEEENTEDQDERGNLRGLIDDGDEE
EDTGGQKSASGGDSDSEEEVRHRRKKRNYNDLDEDDLDLIEENLGVKVKRRKKKYDRVKT
LDDDDDDDEKDLIADEIFHGDGDSEQEEGEAVREPLQQAGDDEEEEDEESDIGDFIVDDD
GQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFAEFDVDAYDQGEEEEEDQDEEGWDRPK
KQTKRRQGRKSIFELYEPSELESSHMTDQDNEIRTTDMPERFQLRSIAVKPAEDEELEEE
AEWIFRHGFSTLTISIQESADYLERGTSTNFSRQGPSTIAKIKEALNFMRNQQFEVPFIA
FYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLSRLFQKMQSYQFEQISADPDKPLA
DGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLRKINQVTE
DGEEEEVEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRDSYQ
RHETEQFPAEPMELAKDYVCSQFPGPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQERAK
INIKPTKKGKKDVDEAHFAYSFKYLKNKAVKELSGDQFLKMCLAETEGLLSIDICIDLVG
VKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLNQFLYPQMAKELKSKLLA
EAKESIVRSCCRRLYNWLKVSPYRPDQQLEEDDDLMDESQGKGIRVLGVAYSPSRDTPVF
CALINGEGEVADFLRLPYFMKRRNAFREDEREKKANDIESLKRFLSSKKPHVVAVAGENR
DAQMIIEDIKRTISELEQESSLPSVGVELVDNELGTLYMNSKKSETDFRDYPPLLRQAVS
IARKIQDPLVEYAQVCSSDEDIICLKLHPLQEHVVKEDLLSALYCEFINRVNEVGVDVNR
AIAHPHTQSLVQYVCGLGPRKGSHLIKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFI
KIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILEN
PERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNLLTK
ETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNH
FDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKF
SVDLTCRTSDLSDKANEWKLPKDTYYDFDAESEDLKLEEELKKKQQRTPYIKRVIAHPNF
HNISFNQAEKMMESLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLG
HTLWINSEEFEDLDEITARFIQPMASFARDLLSHKYFQDCNGGSKEKMEELLVRTKREKP
TFIPYFVSACKALPGKFLLGYQPRGKPRVEYVTITPDGFRYRSQIFPSVNGLFRWFKDHY
QEPVPGITPTNSNSSRTRTPASLNATPANINIADLTRAVNSLPRNMTSQMFNAIAAVTGQ
GQNQNPNSTPAQWGSSQYGYGGSTGGGGSSSAYHVFATPQQPIATPLMTPSYSFTTPSQQ
NMGTPQYPGSTPQSTHAHHNHHSSHHGHGSGTPGSTVSSSRGRTPQQQQPKPSSSGSGGG
STAAVDWGKMAEQWLKEKEAEGRKKTQRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcatcgagagtgaggccgaggagtccgaggaggagtttgaagagaaagag
ttaaagcccaagaagacacagaggttcatggaggatgatgacgaggaggaagaagagaac
actgaggaccaggacgagcgaggcaacttgcgtgggctcatcgatgatggcgatgaagaa
gaggacacgggagggcaaaaaagtgcaagtggaggtgatagcgactcggaggaggaagtc
cggcatcgccgtaagaagcgaaattacaatgacctggacgaggacgatctggacctcatt
gaggaaaacttgggtgtgaaagtcaagaggaggaagaagaaatacgaccgtgtgaaaacg
ctggacgatgacgacgacgacgatgagaaggacctgatcgccgacgagatctttcacggc
gacggagacagcgagcaggaggagggcgaggccgtccgcgagcctctccagcaggcaggc
gatgatgaggaagaagaagacgaggagtcggatattggcgactttatcgtggatgatgat
ggccagccgatcaccaaaaaacggggcaagaagttctccggctacactgatgctgccctc
caggaggcgcaggagatcttcggcggcgactttgactttgctgaatttgacgtcgacgcc
tatgaccagggtgaggaggaggaggaggaccaggatgaagagggctgggaccggcccaag
aagcagaccaagaggcggcagggccgaaagagcatctttgagctctacgagcccagtgag
ctggagagcagtcacatgaccgaccaggacaacgagatccgcaccaccgacatgcccgag
aggttccagctgcgatcgatcgccgtcaaaccagctgaggacgaggagctggaggaggaa
gcggagtggatcttcagacacggtttctccacgctcaccatttccattcaggagagcgcc
gattatttggagcgagggacgtccaccaacttcagccgccaaggccccagtaccattgcc
aaaatcaaagaggcgctcaacttcatgaggaatcaacaatttgaggttccatttattgca
ttctacagaaaagagtacgtggaaccagagctgaacatcaatgacctgtggaaggtgtgg
cagtgggatgaaaagtggactcagttgaagacccgcaagcagaacctttcgcgactcttt
caaaagatgcagtcctaccagtttgagcagatctctgccgaccccgacaaacctttggct
gacgggatacgcccgctggacacggccgacatggagaggctgaaggacgtccagacgctg
gaagagctcggtgacgtgtacaaccacttcctgctctactacggccgagatattcccaag
atgcagaacgccgccaaggccagcaagaagaggctccgcaagatcaatcaagtcacagaa
gacggtgaggaggaggaagtggaggtagaagaagaggaggagcagaagggtccagatctc
aagctggcgtctcgcagggacatgtacagcatctgccaaagcgtgggcctcgacggcctg
gccaaaaagttcggcctgacgcctgagcagtttggcgagaatctgcgagacagctaccag
cggcacgagacggagcagttccccgccgagcccatggagctggccaaagactacgtgtgc
agccagttccccggcccggaggccgtcctggagggcacccgttacatggtggccatgcag
atcgcccgcgagcctttggtccgacacgtgctgcgccagaccttccaagagagagccaag
atcaacatcaagcccaccaagaagggcaaaaaggatgtggacgaggcccactttgcctac
tccttcaagtacctgaagaacaaggcggtgaaggagctcagcggggatcagttcctgaaa
atgtgcttggctgagaccgagggcctgctctccattgacatctgcatcgacctcgttgga
gtcaaagggtacgcaggagaccagacctactttgacgagatcaagcagttctactaccga
gacgagttcagccatcaagtgcaggagtggaaccgtcagcgcaccttggccatcgagaga
tccctcaaccagttcctctaccctcagatggccaaagagcttaagagcaagctcctcgct
gaagccaaagagagcatcgtacggtcgtgctgccgtcgactgtacaactggttgaaggtg
tctccttacaggccagaccagcagttggaggaagatgacgacctgatggacgagagtcag
ggcaaaggcatcagggtgctgggagtggcctactcacccagcagagacacgcccgtcttc
tgcgcgctgatcaatggcgaaggcgaggtggcggactttctgcgcctgccctacttcatg
aagaggaggaacgccttcagggaggacgagcgagagaagaaggccaacgatattgagagc
ctcaagaggtttttgtccagcaagaagcctcacgtggtcgccgtggctggtgaaaaccgg
gacgctcagatgatcatagaggacatcaagaggaccatcagcgagctggagcaggagtcg
tcgctgccctccgtcggcgtggagctggtcgacaacgagctgggcacgctctacatgaac
agtaaaaagtccgagacggactttcgggattacccaccattgctgcgccaggctgtgtcc
attgccaggaagattcaagatcctctggtggagtacgcacaggtctgcagctctgatgaa
gacatcatctgcctcaagctgcatcccctacaggaacacgtggtaaaggaggacctgctc
tccgctctctattgcgagttcatcaatcgggtcaacgaggtgggcgtggatgtgaaccgg
gccatcgctcaccctcacactcagagtttggtccagtacgtgtgcggtctgggcccgagg
aagggctcgcacttgatcaagattctgaagcagaacaacacgcgtctggagaacagaacc
cagctggtcacaatgtgtcacatggggccaaaggtcttcatcaactgtgcaggtttcatc
aagatcgacacggcgtcgctcggagacagcaccgattcctacatcgaggtcctagatggt
tctcgcgtccaccccgagacatacgagtgggctcgcaagatggccgtggatgcgctggag
tacgacgaatccgccgaggacgccaacccggccggcgccctggaggagatcttggagaac
cccgaaaggctcaaagatctcgacctggacgcctttgccgaggagctggagagacagggt
tacggcaacaagggcatcacgctgtatgacatcagagctgagctgagctgcaggtacaaa
gacctgcgggtcccctacagagtccccaacacggaggaggtcttcaacctgctcactaag
gagacaccagagaccttctatattggtaagctgatcaccagcatagtgactggcatcgct
caccggcgcccccagggggagagctatgatcaggccatccgtaatgacgccaccggcctg
tggcagtgtcccttctgccagcaagacaacttccccgagctcagcgaggtgtggaaccac
ttcgatagcggctcctgtcccgggcaggccatcggggtgcggtctagactggacaacggc
gtgcagggattcattcccaccaagttcctgagcgacaaagtggtgaaacaccccgaggag
agagtgaaggtgggcatgacggttcactgtcgcatcatgaagatcgacatcgagaagttc
agcgtggacctcacgtgtcgcacctccgacctctcggacaaggccaacgagtggaagctt
cccaaagacacctactacgactttgacgccgaatctgaagatctcaagctggaggaggag
ctgaagaagaaacagcagcgcacgccgtacatcaagcgggtcatcgctcaccccaacttt
cacaacatcagcttcaaccaggctgagaagatgatggagtccctggaccagggagacctg
atcatcaggcccagcagcaagggagagaaccacctcactgtcacctggaaggtggctgac
ggcatctaccaacatgtggatgtgagagaagaaggcaaagagaacgccttcagcttagga
catacgctctggatcaatagtgaggaatttgaagacctggatgaaatcacagcacgcttc
attcaacccatggcgtcgttcgctcgggacctgctgagccacaaatactttcaagattgt
aacggcggaagcaaggagaaaatggaggagctgctggtcaggaccaaaagggagaagccc
actttcattccgtattttgtgtctgcgtgtaaagctttgcctggaaagttcctgctaggc
taccaacctcgaggaaagccacgggtggagtacgtgaccatcaccccggatggcttcagg
taccgctcgcagatctttccctcagtcaacggcttgttccgctggtttaaggaccactac
caggagcctgttccaggcatcacacccaccaacagcaacagcagccgcacacgcacgccc
gcctcgctcaacgccacgccggccaacatcaacatcgccgacctgacgcgagccgttaac
tcgctcccgcgaaacatgacctcgcagatgttcaacgccatcgccgccgtcactggtcag
ggccagaaccagaaccccaactccacaccggcccagtggggatccagccaatacggatac
ggaggcagcactggaggaggcggcagctcctcggcttatcacgtgtttgccacgccccag
cagccaatcgccacacccttgatgacaccaagctactcattcactacgcccagccagcag
aacatgggcacgccacagtacccgggctccaccccccagtccacgcacgcgcaccacaac
caccacagcagccaccacggtcacgggtcgggcacgccgggctcaaccgtgtcgtcgtcg
cggggccggactcctcagcagcagcagccaaagccaagcagtagcggaagcggcggcggc
tccaccgccgcagtggactggggcaagatggccgagcagtggctgaaagagaaagaggcc
gaaggtcggaagaagactcagagaatgaccccgcgaccttcacccagccccatgatcgag
agcacccccatgtccatcgccggggacgccacgcccctgctggacgagatggaccggtag
DBGET
integrated database retrieval system
