Syngnathus scovelli (Gulf pipefish): 125982272
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Entry
125982272 CDS
T08785
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00562
Inositol phosphate metabolism
sscv01100
Metabolic pathways
sscv04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
125982272 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
125982272 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125982272 (synj1)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
125982272 (synj1)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
125982272 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Motif
Other DBs
NCBI-GeneID:
125982272
NCBI-ProteinID:
XP_049598658
LinkDB
All DBs
Position
15:2987675..3001760
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AA seq
1539 aa
AA seq
DB search
MAFSKGYRVYHKLDPPPYSVIVETRARDECLMFESGAVAVLSAAEKEAIKNTYSKIVDAY
GILGVLRLNLGDSMLHSLVLVTGCSSVGKVQESEVFRVTQTDFVSLKNDPGDEERIGEVR
KVLNSGHFYFAWSASGVGMDLSLNARRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQAIFLD
DRVSSFIQIRGSIPLFWEQPGIQKKTLKGVMLYLNDNRQPNRRQGKPHLVGSHRVKLSRG
FEANAPAFERHFTALKRLYGKQVIINLLGSKEGEHMLSKAFQSHLKASEHAAWVKMVNFD
YHQNVRGGKADKLHSVLKPQLSKFLDDCGFFYYSGEMGITRSQGGTIRTNCLDCLDRTNS
VQAFFALEVLPKQLEEMGLTEKPQLVARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKA
SKLKDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYVTEPVL
QSASPRVLLGMCRNHHKYTRPKPIRVCVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKIA
GHPEFQDSKANPVDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNISRDHKYVLLA
SEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSH
FAAGQSQVKERNDDYNEITRRLSFPMGRLLYSHDYVFWCGDFNYRINLPNEEVKDLIRQQ
NWDALTAGDQLFDQKNAGLVFRGFIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRIL
WKRRKWNFDKTAEEMNVVGASTSGENEDDPDCPWSPGTLKYYGRAELKTSDHRPVVAIVD
VDVLEVDPEARHQVYKDVIALQGPPDGTVLVSLCSSGPDDYFDDALIDELLDKFASFGEV
ILIRFVEEKMWVTFLDGYSALAALSLSASTVLGKMLDIRLKSPGWIKSLEEEMSVERICG
SIPTSASSTLLAEDADMGDDDYDMEGDVDEEVEAVLPQHLQPSADSASGSSPMTSPRGSP
CASPTHGEAGRPGRTAQPARPSQGPPADLQPGAPSSQGLEPRRAPPPRPNAPPVRPTPPQ
RPPPPSGSKSPALPRSVAGRGQATAGPPAAAGSSRPNLPPRAGVISVAPQSRASPLPHPG
APRPTSDVHPGAPRVNADTHPGAPRPTKPSDLPLAGPAVAPAARPSAQPQPTGPTQSQLP
PPMQPTHAAPPQTLASPKPPPRSRSHHGLPPDAAKGDSAPKTNGVNGVQSKPKGPDALDF
LIPSRSLNRGVSLRSPPSVPASLSSLMSAGLLPPPPAMPRSRSQETLRASPNLLAAEPLP
ARPCSTNPFYGQHDWVPPVRATVGPQRLSRGASPITLSSATQPVLPLHRQPPNWVTFNDD
FPATPSSAALTEPDWVTEAVVPSAPPLEFDVFPEPDWLNPSPAFPAHQAKTLPPNTALFP
EPDWLSSIPGVLPPVPSRSDAAVANPPSGSGPGCLLFPN
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggttatcgtgtctaccacaagctggacccgcccccctacagcgtg
atcgtggagacgcgcgctcgggacgagtgcctcatgttcgaatccggtgccgtcgccgtc
ctctctgcggctgagaaggaggccattaagaacacgtattccaagatagtggacgcctac
gggatcttgggcgtcctccgcctcaacctgggcgactccatgctccacagcctagtgcta
gtgacgggctgcagctcggtgggcaaagtgcaggagtctgaagtgttccgggtgacgcag
acggactttgtgtcgctgaagaacgaccccggagatgaggaacgcatcggcgaggtgcgc
aaggtgctcaactcgggtcacttctactttgcctggtccgcctcgggcgtcggcatggac
ttgagcctcaacgcgcgccgccgcatcctggaggacaccacagacaatcgcttcttctgg
aaccagtcgctgcacctgcacctgaagcattacggcgtcaactgcgacgactggctgctg
cggctgatgtgcggcggtgtggagatccgcacgatctacgccggccacaagcaggccaag
gcgtgcatcttctcccgcctcagctctgagcgggccggcacgcgcttcaacgtgcgcggc
accaacgacgacgggcaggtggccaactttgtggagaccgagcaggccatcttccttgat
gacagagtatcgtcgttcatccagatccgcggctccattccactcttttgggaacagccg
gggatccagaaaaagacccttaagggggttatgttgtacctgaacgacaatcggcaaccc
aatcgacgccaaggcaaaccccacttggtcggctctcaccgcgtcaaactctcccgagga
tttgaagccaacgcgccagcctttgaaagacacttcaccgccttgaagaggttgtacggc
aagcaagtgatcatcaatctcctcggcagtaaggaaggagaacacatgctcagcaaagcc
tttcagagtcacctgaaggcttcggagcacgcggcgtgggtcaagatggtcaacttcgac
taccaccagaacgtgcgcggcggcaaagccgacaagctgcacagcgtgctcaagccgcag
cttagcaagttcctggacgactgcggcttcttctactactcgggagagatgggcatcacc
aggagccaaggtggcaccatcaggaccaactgcctggactgtttggacagaaccaacagc
gtgcaagccttctttgccttggaggtgctgcccaagcaactggaggaaatgggcttaacg
gagaagcctcagctggtggcccgcttccaggaggtgttccggaccatgtggtcagccaac
ggtgactcggtcagcaagatctacgccggcaccggcgctctagacggcaaggccaaggca
agcaagttgaaagacggcgctcgctcggtgaccaggaccatccagaacaacttctttgac
agctccaagcaggaagccatcgacatcctgcgactgggctccacgctcaacagcgaccta
gccgacaaggcgcgggccttgctcaccacttccagcctctacgtcactgagcccgtcttg
cagtcagcctcgccccgggtgctactagggatgtgccggaaccaccacaagtacacgcgg
cccaagccgatccgagtgtgcgtgggcacgtggaacgtcaacggcggcaagcagttccgc
agcatcgctttccgcaaccagacgctcaacgactggctgctggacgcccccaagatcgcc
ggccaccccgagttccaagacagcaaagccaacccggtcgacatctttgccatcggcttt
gaggaaatggtggagctgaacgccggaaacatcgtcagcgccagcaccaccaaccagaag
ctgtgggccgccgagttgcagaagaacatctcgcgggaccacaagtatgtgctgctggct
tccgagcagctggtgggcgtgtgcttgttcgtgttcatccgcccccagcacgcccccttc
atcagggacgtggcagtggacacggtgaaaacgggcatgggcggcgccacgggcaacaaa
gggggcgtggccatccgcctgctcttccacaccaccagcatctgcttcgtgtgctcgcat
tttgccgcgggacaatcacaagtcaaggaaaggaacgacgactataacgagatcacgcgc
aggctcagcttccccatgggacgcctgctctactctcacgactacgttttctggtgcggc
gacttcaactaccgcatcaacctgcccaatgaggaggtgaaggatctgatcaggcaacag
aactgggatgcgctgaccgctggcgaccagctctttgaccagaagaacgccggactggtg
ttccggggattcatcgagggcaaactggactttgcgcccacgtacaagtacgaccttttc
tcggaggactacgacaccagcgagaagtgccgcacgccagcctggaccgatcggatcctg
tggaagcgcaggaagtggaactttgacaaaacagctgaggagatgaacgtggttggcgct
tcgacgtcaggcgagaacgaggacgacccggattgcccctggagccccgggaccctcaag
tactacggcagggctgagctcaagacctcggaccacaggccggtggtggccatcgtggat
gtggatgtcctggaggtggacccggaggcccggcaccaggtctacaaagacgttatcgcc
ctgcagggacccccagacggcacggtcttggtgtcgctgtgctcgtccggacccgacgac
tactttgacgacgcgctcatcgacgagctgctcgacaagtttgccagcttcggcgaggtc
atcctcatcagatttgttgaagagaagatgtgggtgacgttcctggacggttactccgct
ctggccgctttgtctctcagcgcatccactgttcttggcaagatgctcgacatccgcctg
aagagccccggctggattaagagcctggaggaggagatgagcgtggagcgcatctgcggc
agcatccccacctcggctagctccaccctgctggccgaagacgccgacatgggcgacgac
gactacgacatggagggcgacgtggacgaggaggtggaggcggtccttccgcagcacctg
caaccgtccgccgactcggcgtcgggctcctctccgatgacctccccgcgaggcagcccc
tgcgcctcccccacccacggcgaggccggcaggcccggacgcaccgctcaaccggcccga
ccctcacaaggccctcctgcagacctgcagcccggcgcgccgtcatcccaaggcttggag
cccaggcgtgcgccccctccccgacccaacgcgccccccgtgagacccacgccgccccag
cgcccgccgcccccctcaggatcaaaaagcccggctctccctcggtccgtcgcaggtcga
ggccaggcaaccgcaggaccccccgcagcggcgggttcctccaggccgaatcttccccct
cgagccggcgtgatcagcgtggctccgcagtctcgtgcctctcctctgccccaccccggc
gctccccgccccacctccgacgtgcacccgggggcccctcgagtcaacgctgacacccat
cccggggcgcctcgacccaccaaaccgtctgatcttcctctagcgggtcccgcggtggcc
cctgcggcgagaccgtcggcacagccccagcccaccggcccgacccagtctcagctgcct
ccccccatgcagcccacgcacgccgccccgccgcagacgctggcctctcctaagccaccg
ccccgttcccgatctcatcatggtctgccgccggacgccgccaagggcgactcggccccc
aagaccaacggagtgaatggcgtccaatccaagcccaagggcccggacgccctcgacttc
ctgatcccttcccgatccctgaaccgcggcgtctccctgcggagtccgccctccgtcccc
gcctccttatcgtccttgatgtccgccggcctcctcccgccgccgcccgctatgccccgc
agccgctcgcaagagaccctgcgcgcctccccaaaccttttggccgccgagccgctcccc
gcccggccctgcagcaccaacccgttttatggtcagcacgattgggtgccgcccgtccgc
gccacagttggcccgcagcgcctctctcggggcgcgtccccgatcacgctctcttcggcc
acgcaacccgtcctgccgctccaccgccagcctcctaattgggtcaccttcaacgacgac
ttcccggcgacccccagctccgccgccctcaccgaaccggactgggtaactgaagctgtg
gtcccgtcggcccctcccctcgaattcgacgtgtttcctgagccggactggttaaaccct
tccccggccttccccgcccaccaggccaaaactttgccccctaacacggccctctttccc
gaacccgactggttaagctccatcccgggcgttcttcctccagtcccgtcgcgctccgac
gccgctgtcgccaacccccccagcggatccggtcccggctgcctcctctttcccaactga
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