Syngnathus scovelli (Gulf pipefish): 125982295
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Entry
125982295 CDS
T08785
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X2
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125982295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125982295
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125982295
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125982295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
125982295
NCBI-ProteinID:
XP_049598706
LinkDB
All DBs
Position
15:complement(3807703..3853891)
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AA seq
787 aa
AA seq
DB search
MTVPPWRLAGLWPWLLMAALQVVLGQPGPESELSALQALIKVTLVKHEPTGSPITLKGKF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQEGDFITIVKLEKKVPRCLPLLDKARMALEKG
AQAVIFDVSDDDNAAAELRETDSLPRPVVLVYAEDAEELMTLVNKNEEAKVRIEILVEQS
RWSHEVGILLTIVLAVVTIILIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYISQGCS
SSQRLRGAWGSASSSNSTPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCPL
CMHNIMGAERHGQRNRLQSSPEQRFLHPQAYSSPRNHPFPQHDIPFSMRPHYPRGPSGSY
SSVGHYNSSSPMANQTLHLLTSSRPLGAPCGYHLPAEGPRRPHRTGGNCRPSSHHYTPRR
SCHNYRSSCPAQRSASNSRVHHIPQSRGLAAHGRLDEGSCSGGSYHTDRSGYLADGPASD
SSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYFGPGSVEVEAQSRPR
SLDSVVNKVGCPEEQPQAVFSHIHYHRHRHHHYEDGEHGQGPNRGSDEEVGTAAPPPTLV
LDKDSPKSSHCQCQKPDCTHLPSAGAEGRDQDPSPSSGPSVLVPLHLQTHCCHQGHPPAA
LGRSCVRDHPSVRFHQSLDLQDDRSIRVHFGQGSGFCCSPPELHPALLPVPLILDSGGID
DWPCCAGVVWQKRVQEAHSEPQLLGTKTSIERPPCTSHHGLTADRNTDICLYCQKIYNQG
SEEESGV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccccccgtggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcccggaatccgagctgtcggccctccaagcgctcatc
aaggtgacgctggtcaagcacgaaccgacggggagtcccatcactctgaaagggaagttc
gtgggaggcagcgccggttacgcggaggggaaactcatgcagtatcaccctttgtcactg
tgcaacaccagcgaagatgaacggcaagagggtgacttcatcaccatcgtcaaactggag
aagaaggttccccgctgtcttcctctgctggataaggcccgcatggcactggaaaaggga
gctcaggcggttatttttgatgtcagcgatgacgacaacgcggctgccgagctgagagaa
acggactcccttccccgcccggtcgtgctggtgtatgctgaggatgcggaggagttgatg
actctggtcaacaagaacgaggaggctaaagttcgtattgagatcttggtggagcagtcc
agatggtcacatgaggtgggtatcctgctcaccattgtcttggctgtcgtgaccatcatc
ctcatttttgctttccgctataaatgcaagtccaatagaacttgggactcggtgcatcag
cagaccatgagggcaattagtcgattggagaccaaaacctacatctcccaagggtgctca
agctcacagcgcctccgtggggcctggggttcagcaagcagctccaactccaccccagta
tgtgctatctgcctggaggagttccaggatggccagcatctcaggatcatctcctgcgct
catgagtttcataaagattgtgtcgatccctggctgctgcagcaccgcacttgtcctctg
tgcatgcacaacatcatgggggctgagaggcacggccagaggaaccgactccaatccagt
ccggagcaacgtttcctccaccctcaagcttacagcagcccacgaaaccacccgttcccc
cagcatgacatccctttctccatgaggccacactatccccgtggaccttctggctcgtac
tcctcagtcggccactacaattcctcatctcccatggccaaccaaacgcttcatttgctc
accagcagcaggccgctgggtgctccttgtggctatcaccttccagcagaaggtcccagg
agaccccacaggacagggggtaactgcaggccttccagtcaccactacacccctcgccgg
tcctgtcacaactatcgttcatcttgtccagctcagcgtagtgcctccaactccagagtg
caccacatcccacaaagccgtggactggcggcccacggccgactggacgagggcagctgc
tccggcggcagctaccacacggaccgcagtggatatttagccgacgggccggcgagcgac
tctagctccggaccgtgccacggctcctccagcgactcggttctgaactgtaccgacgtg
tccctgcagggagtttacggcagctggtccacttttcgcagctcgctgagtagcgactac
gacccgtttgtgtattttgggccgggttctgtggaagtggaagcccagagccggcctcgg
tctctggattcggtggtgaacaaagtgggctgccctgaggagcaaccgcaggctgtgttt
agccacattcactaccaccgccatcgacaccaccactacgaggacggggagcacggccag
ggcccaaacagaggctcggatgaggaggtcgggacagccgccccccctccgacactggtc
ttggataaagactcacctaagtccagtcactgccagtgccaaaaaccagactgtacacat
ctgcctagtgctggggcagaaggtcgggatcaggacccaagcccgtcttcgggaccttct
gtcttagtgcccttacatttacaaacccactgctgccaccagggacaccctcccgcagct
ctcgggcggagctgtgtacgagaccacccttctgttcgcttccaccagagcttggacctt
caggatgatcggagcatccgcgtccatttcggccaaggctcgggcttttgctgctctccc
cctgaacttcaccccgccctccttcctgtacctctcattctggactcgggaggtatagac
gattggccctgctgcgccggagttgtttggcaaaaacgggtgcaggaggcccactctgaa
cctcagctcctggggaccaagacctccatcgagagacctccttgcacatcccatcatggc
cttactgcagatcgcaacacagacatttgtttatactgccaaaaaatatacaatcaggga
tctgaagaggagtccggtgtgtga
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