Syngnathus scovelli (Gulf pipefish): 125982316
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Entry
125982316 CDS
T08785
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125982316
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125982316
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
125982316
NCBI-ProteinID:
XP_049598745
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Position
15:complement(3869482..3877718)
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AA seq
610 aa
AA seq
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MFGSSLKEEPPLGNMVQVAGMNAARGWMLGCPQGGSGGLLDANTAAQSGVAVGRAHFEKQ
PPSNLRKSNFFHFVVALYDRQGQPVEVERTNFIDFIEKDKESAGEKTNNGIHYRLQLLYN
SGIRTEQDFYVRLIDSTSKQPIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETP
SDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLSVSDNMFVHNN
SKHGRQARRLQPAAATPSYLLHGASPCIRAISPGEGWTSGGATVIVIGENFFDGLQVIFG
SATVWSEMITPHAIRVQTPSRHIPGVVEVTLAYKSKQFCKAMPGRFIYTALNEPTIDYGF
QRLQKVIPRHPGDTDNLPKEVILKRAADLLEALYALPHTDQEASAKRAANIAEALYSVPR
GHAQLSGTAHPDATGVSSFAGQRCVNLTEPSQTDRGFVRPGGGNGLSPHAYASASSTPLH
AGYSHARTPSPHAYISNAAVSNLGASPTFINASAANSPYAVVPSSPTMASLTSLPANCSA
SSAAVGVFSFSPATLVSAAVKQKSAFAPVVRPQSSSPPPPSCSNASGLQDGNFAEPVKFS
SGALQGLAFS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagcagcctgaaggaggagcctccgctgggcaatatggtccaagtggcgggc
atgaacgcagcccggggatggatgctggggtgtccgcaggggggcagcggcggcctgctg
gacgctaacaccgccgcgcagagcggtgttgcagtgggtcgggcgcacttcgagaagcag
ccaccctccaacctgcgcaagtccaacttctttcacttcgtcgtggcgctttatgaccgc
caagggcagcccgtggaagtggagaggaccaacttcatcgacttcatcgagaaagacaag
gaaagtgcgggtgagaagaccaacaatggaatacactacaggctgcagctgctctacaac
agtggtatcagaacggagcaagacttttacgtccgactcattgactccaccagcaaacag
cccattgtctacgagggccaagacaagaaccccgagatgtgtcgggtattgctcacgcac
gaaatcatgtgcagtcgctgctgcgacaagaagagctgcggcaatcgcaacgagacgccc
tcagaccccgtcatcatcgacaggttcttcctcaagtttttcctcaagtgcaaccagaac
tgtctgaaaaacgccgggaacccgcgagacatgaggaggttccaggtggtggtgtccacg
acggtgagcgtggatggtcacgtgctttccgtgtccgacaacatgtttgtccacaataac
tccaaacatggccgccaggcccggaggctccagccggccgccgccacgccgtcgtacctc
ctccatggggcctcaccgtgcatccgcgccatcagccccggagagggttggaccagcggg
ggtgctacggtcatcgtcatcggggaaaacttctttgacggcctgcaggtcatcttcgga
tcggcgacggtgtggagtgagatgatcacgccgcacgccatccgcgtgcagacgccgtcg
cggcacatccccggcgtggtggaggtcacgctggcctacaagtccaagcagttctgcaag
gccatgccgggacgcttcatctacacggctctcaacgagcccaccatcgattatggcttc
caaagactacagaaggtcatccctcgccaccctggagacactgacaacctgccaaaggag
gtaatcctgaagcgagcggctgacctgctggaggcgctctacgccctgccgcacaccgac
caggaagcgtcggcgaagcgagcggcgaacattgcagaagctctatacagcgttccacga
ggccacgcccagctatctggcaccgcccaccccgacgcaacaggtgtgagctcattcgcc
gggcagcggtgcgtcaacctgaccgagccctcgcagaccgatcggggtttcgtccggccc
ggcggcggtaatggactatcacctcacgcgtacgcatctgccagctccacgccgctgcat
gccggctactcgcacgcacgcacgccatcgccgcacgcgtatattagcaacgctgctgtt
agcaacctgggagcatcgcccaccttcatcaacgcatcggccgccaactcgccttacgcc
gtggtcccttccagccccacgatggcgtcgttaacgtctttgcccgccaactgttcggcg
tcgtcagcagcggtgggcgtgttctcattctcgcctgccacgttggtgtcggccgccgtc
aagcagaagtcagccttcgcgccggtagtcagacctcagtcgtcgtcgccgccgccacca
tcttgtagcaacgccagcggactgcaagatggcaactttgcggagccggtgaagttctca
tcgggcgcgcttcaagggctggcgttcagttaa
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