Syngnathus scovelli (Gulf pipefish): 125982336
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Entry
125982336 CDS
T08785
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
sscv04520
Adherens junction
sscv04916
Melanogenesis
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125982336 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125982336 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
125982336 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125982336 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125982336 (tcf7)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
125982336 (tcf7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125982336
NCBI-ProteinID:
XP_049598786
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Position
15:complement(3655548..3677787)
Genome browser
AA seq
485 aa
AA seq
DB search
MPQHGGDDLGATDEMIAFKDEGEQEEKVHQECAFTEQDLADLKSSLVNESEIHQHSPGGG
PGGGNGASSAVRRGQPAEQQRGFPDKHREQLDAASKQQDGGVYKTSGYPGYPFLMLPDPY
LPNGSVSPTSNKVSVVQQSHGMHPLTSLLPYGNEHFGSSPPHMPTDMSQKTGVHRHQAQD
LSGYYPLPSGGVGQITPSMGWQKQTAYPAALSTCGFRQSFPSNLPTASSYSRYCSRFSHS
LMLGPSGMHPTGIPHPAIVPPSGKQEHDHYDRGMYAKPHVEAKREKEPKKPVIKKPLNAF
MLYMKEMRAKVIAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPTW
SARDNYEAAGEKSKADWGKKKRRKREKQQDSNTEPGSPKKCRARFGLKQQTNWCGPCRRK
KKCVRYIQGGGYASPTCSHLSAVDSTPPPSPATLTRGPPLQQQLHQRPSRPPSATALGKR
KLSAT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagcatgggggggacgacctgggagccaccgacgagatgatcgccttcaaagac
gaaggtgagcaggaggagaaggtccaccaggagtgcgccttcaccgaacaggacctggca
gaccttaagtcgtcgctagtcaacgagtccgagatacaccagcacagcccgggcggcggc
cccggtggcggcaacggcgcctcctcggcggtgagacgggggcagccggccgaacagcag
aggggcttcccggacaaacacagggagcagctcgacgccgcgtccaagcagcaagatggc
ggtgtgtacaagacgtccgggtaccccgggtaccccttccttatgctccccgacccctac
ctacctaatggctccgtgtcgccaacgtccaacaaggtgtctgtggtgcagcaatcccac
ggcatgcatccgctcacgtcgctgctgccctacggcaacgagcacttcggtagcagcccg
ccgcacatgccgaccgacatgagtcagaagacgggcgttcacaggcaccaagcccaggac
ctttcaggatactaccctctcccttcaggcggtgtcggacagatcacgccctccatgggc
tggcagaagcagacggcgtaccccgccgctctgtcaacgtgcggcttccgacagtccttc
ccttccaaccttcccaccgcctcgtcctactccaggtactgcagcaggttctctcactcg
ctcatgctgggcccatcaggcatgcaccccacgggaatcccgcaccccgccatcgtgccc
ccttcaggcaagcaggagcacgaccattacgacagaggcatgtacgcaaagccgcacgtg
gaggctaagcgggagaaggaacccaagaagcccgtcatcaagaagccgctcaacgccttc
atgctctacatgaaggagatgagggccaaagtcattgcggagtgcacgctcaaggagagc
gccgccatcaaccagatactcggacgaaggtggcacgcgttgacacgtgaggagcaggcc
aagtactacgagctggcacgcaaggagagacaacttcacatgcagctgtaccccacctgg
tccgcacgcgacaattacgaggcggcaggtgaaaagagtaaagccgattggggaaagaaa
aagaggagaaaaagggagaagcagcaagattccaacacagagcccgggtcccctaagaaa
tgtcgagctcgctttggcctcaagcagcagacaaattggtgcggtccctgcaggaggaag
aaaaagtgcgttcgctacattcaaggaggaggctacgcgagcccaacttgttcacattta
agtgccgtagactccacgccgccgccctctcccgccactctcacccgcggaccccccttg
caacaacaactacatcagcgcccctctcgccccccttccgccacggccctgggcaaacgc
aagttgtcggccacgtga
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