Syngnathus scovelli (Gulf pipefish): 125982361
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Entry
125982361 CDS
T08785
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125982361 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125982361 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125982361 (pdlim4)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
Dscam_C
DUF7510
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125982361
NCBI-ProteinID:
XP_049598853
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Position
15:complement(3267602..3280091)
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AA seq
377 aa
AA seq
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MPYSVTLKGPSPWGFRLVGGRDFSTPLTISRVTAGSKAAQGDLCPGDTILAINDDITEHM
THMEAQNLIKNSTRQLTLVISRSGSGERVWSPVGSEDGKMSPYMESDSQNFRPITSGYGN
YNRKPSYTPEPPPPLLPVQNYQHHQQQQQLQATNHPLNGHSKTNNGHGNAYGNGHAQYNN
PTPLYAPNGSNGERSIHGKMAGLNLSAPHSPEPPAPSPVQSRDGVDVQSHVYKMLTDFEQ
PSSEPKQSGSFKYLQGMLEAEDGGVSPTDRMRSLKSPVRSSVPKLGSPLPSGVSGLQKLP
QCTRCTNGIVGTIVKARDKLYHPECFVCDDCGTNLKQRGYFFIEDNLYCETHAKARVQPP
EGYDVVAVYPNSKVEIV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccctacagcgtgactctcaagggaccctccccgtggggctttcgcctggtcggggga
cgagacttcagcacgccgctgacaatctccagggtaacggccggcagcaaggcggcccag
ggcgacctgtgcccgggcgacaccatcttggccatcaacgatgacatcacagagcacatg
acccacatggaggcccagaacctcatcaagaactccactcggcagctcacgctcgtcatc
agcaggtcgggatcaggagaacgagtttggtcaccggtggggagcgaagacggcaagatg
agcccttacatggaatcggactcgcagaacttccgtcccatcaccagcggctacggcaac
tacaaccgcaagccctcgtatacccccgaaccgcccccgccgctgctccccgtgcaaaac
tatcaacatcatcaacagcagcagcagttgcaagccaccaaccatccgctcaacggccat
tccaagaccaacaacgggcacggcaacgcctacggtaacgggcacgctcagtacaacaac
ccgactccgctgtacgcccccaacggcagtaacggggagcgatccatacacggcaaaatg
gcaggtctcaacttgagcgccccccacagccccgagcctcccgccccctcccccgtccag
agccgcgacggcgtggacgtgcagtcgcacgtctataagatgctgacggacttcgagcaa
ccatcctcggagcccaagcagtccggatccttcaagtacctgcaggggatgctggaggcc
gaggacggaggtgtgtctccgacagatagaatgaggagcctgaagtcgccggtgcgatcg
tccgtccccaaactgggaagccccctccccagcggcgtgtcgggcctccagaagcttccg
cagtgtacacgctgcaccaacggcattgtggggaccatcgtgaaggcccgcgacaagctg
taccacccagagtgcttcgtgtgcgacgattgcggcacaaacctgaaacaacgcggctac
ttcttcatcgaggacaacctgtactgcgagacgcacgccaaggctcgtgtgcagcctccg
gagggttacgacgtggtggccgtctaccccaactccaaggtggagatcgtgtga
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