Syngnathus scovelli (Gulf pipefish): 125982391
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Entry
125982391 CDS
T08785
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125982391 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125982391 (exosc8)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125982391 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125982391
NCBI-ProteinID:
XP_049598896
LinkDB
All DBs
Position
15:complement(3529639..3531487)
Genome browser
AA seq
273 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTSINIGSISTADGSALVKMGNTTVIC
GVKAKLANPLVEAPGKGFIVPNVDLPPLCSSQFRPGPPGEQAQAASQFMADIIESSEVLH
TEDLCIERAKLCWSLYCDLMCLDYDGNLLDACSLALLAALKNTALPEVSINGETGVPQVD
LEKRCGLKIGSHPVATSFCAFDDSVLADPTADEEQLATSRLTVVTDEEGRLCSMHKPGGT
PLSGEKLRELIGRATARQKELHKLIDKVIKSIT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggatttaagacggctgaacctctggagtaccaccgcagctttctgaaagaa
aactgtcgaccggatggacgtgaactgtcagaattccgaaccacgtcgatcaacattggg
tccatcagcacagcagatggctcagcgctggtcaagatgggcaacaccaccgtcatctgt
ggggtcaaagcgaagctggcaaacccattagtcgaggcgccggggaaaggtttcatagtg
cccaacgtggacctgccgcctctgtgctcctcacagttccgacccggaccaccgggggag
caggcccaggccgccagtcagttcatggccgacatcattgagagctcggaagtgttacat
acggaagatttgtgcatcgaacgagccaagctgtgctggtcgttgtactgcgacctgatg
tgtctggactacgacggcaacttgttggacgcgtgctcacttgccttgctggccgccctg
aagaacaccgcgctccccgaggtctccatcaacggcgagactggcgtgcctcaggtggac
ttggaaaagcgatgtgggttgaagatcggcagccatcccgtggccacctccttctgcgcc
tttgatgactccgtcttggcggatcccacggctgacgaggagcaactggccacctctcgc
ctcactgtggtgacggacgaggaaggacgcctgtgctccatgcacaaaccgggtgggacg
cctttgtctggggagaagctccgagagttgatcggccgagcgacagcgcggcagaaagaa
ctccacaaactcatcgacaaagtcatcaaaagcatcacataa
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