Syngnathus scovelli (Gulf pipefish): 125982440
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Entry
125982440 CDS
T08785
Name
(RefSeq) claudin-4
KO
K06087
claudin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03272
Virion - Hepatitis viruses
sscv04382
Cornified envelope formation
sscv04514
Cell adhesion molecules
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125982440
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125982440
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125982440
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125982440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125982440
04147 Exosome [BR:
sscv04147
]
125982440
04515 Cell adhesion molecules [BR:
sscv04515
]
125982440
Cilium and associated proteins [BR:
sscv03037
]
Other cilia and associated proteins
Stereociliary proteins
125982440
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
125982440
Exosomal proteins of colorectal cancer cells
125982440
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
L1 family
125982440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
125982440
NCBI-ProteinID:
XP_049598964
LinkDB
All DBs
Position
15:3735185..3739175
Genome browser
AA seq
377 aa
AA seq
DB search
MSSVGLELAGVSVAVVGWLLSVVSCALPMWRVSAFIGANIVTAQVYWEGLWMSCVFQSTG
QMQCKVYDSMLALPPDLQAARALTVVSIIIGVLALLISMVGAKCTNCIEDEGVKARVTIT
SGAAFIVAALAELVPVSWSANTIVVEFYSPVVLSGQKMEIGAAMSMGMELVGICLGVLGF
LMSIVTCALPMWKVTAFVGANIITAQTIWEGLWMNCVTQSTGQMQCKVYDSMLALPQDLQ
AARAMMIVAIILGILGALVSTTGAKCTNCIEDEGAKAKVMILAGIMFILAGLLVLIPACW
TAHVVVRNFYSPILTNPQRRELGASLYIGWGASALLLIGGAILCSSCPPKERRYKPPRMA
YSAPRSNNTGYDRKDYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgttggactggaactggccggcgtgtcggtggcggtggtgggttggcttctg
agcgtggtgagctgcgcgctacccatgtggcgggtgtcggccttcatcggcgccaacatt
gtgacggcgcaagtgtactgggaaggtctgtggatgagctgcgtgttccagagcacgggc
cagatgcagtgcaaggtctacgactccatgctggcgctgcccccggatcttcaggcggct
cgcgccctcaccgtggtgtccatcatcatcggcgttctggctctgctcatctccatggtg
ggcgccaagtgcaccaattgcattgaagatgaaggcgtcaaagcccgggtgaccatcacg
tccggcgccgccttcatcgtggcggcactggccgagctggtacctgtatcctggtcggcc
aacaccatcgtggtggagttctacagccccgtcgtcctgtcgggacagaagatggagatc
ggggcggccatgtcgatgggaatggagctagtgggcatctgcctgggcgtgttgggcttc
ctgatgtccatcgtgacgtgcgccctgcccatgtggaaggtgacggcgttcgtgggcgcc
aacatcatcacggcgcagaccatctgggagggcctgtggatgaactgcgtgacccaaagc
acgggccagatgcagtgcaaggtctacgactccatgctggcgctaccgcaggaccttcaa
gcggcgcgggccatgatgatcgtggccatcatcctgggcatcctcggggcgctggtgtcc
accacgggagccaaatgcaccaactgcatagaggacgagggagccaaggcgaaggtgatg
atcctggcggggatcatgttcatcctggccggcctcctggtcctcatcccggcgtgctgg
accgcccacgttgtggtgcgcaacttctacagtcccatcttgaccaacccgcagcggcgg
gagctgggcgcgtcgctctacataggctggggggcctccgccctgctcctgatcggtggc
gccatcttgtgcagcagctgcccgcccaaggagcgacgctacaagccccccaggatggct
tactcggcgccacgcagcaacaacaccgggtacgaccgcaaggactacgtgtag
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