KEGG   Syngnathus scovelli (Gulf pipefish): 125982506
Entry
125982506         CDS       T08785                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125982506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sscv04121]
    125982506
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125982506
Ubiquitin system [BR:sscv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     125982506
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125982506
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 125982506
NCBI-ProteinID: XP_049599162
LinkDB
Position
15:9321302..9329790
AA seq 818 aa
MASSNLLKNKGSLQFEDKWALMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGTTKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPDDKLQIYRDNFEKAYMDSTERFYRTQAPAYLQQNGVQNYMKYADSKLRE
EEKRALRYLETRRDCNSVQALMECCVNALVTAFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEEHIVSAGLADMVASAETITSDSEKYVEQLLTLFNRFSRLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPMKQKGAGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWVKSTQRGTEKTFETVVIMGLLVLCT
SHVRRVPLLPLLQSLVAFPKLKRQVLSYDPAVSSPKDFAEGTLFYINQEFSLIKNSKVQK
RGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKRINNAQLQTELVEIL
KNMFLPQKKMIKEQIEWLIDHKYIKRDEADINTFIYMA
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggcgtcgtctaatttgctgaagaacaaaggctcccttcagtttgaggataaatgggcc
ctaatgcgtcccatcgtactaaaactgttacggcaagagtcggtcaccaagcagcagtgg
ttcgaccttttctcagatgtccacgccgtgtgcctgtgggatgacaaaggtcccgctaag
atccaccaggcccttaaagaggacatcctcgactttatcaaacaagcacaagcgcgggtg
ctgagtcaccaggatgacacagcactgctgaaggcctacattgtggagtggcgcaagttc
ttcacgcagtgcgacatcttgcccaagcccttctgccaactggagatcaccttgatgggc
aagcagggcaccaccaagaagtccaatgtggaggacagcatcgtgcgaaagctgatgctg
gacacgtggaacgagtccatcttctccaacatcaagagcaggctgcaagatagcgcaatg
aagctggtccatgccgaacggctgggggaagcctttgattctcagttggtcatcggagta
cgagagtcctacgtgaacttgtgctcaaaccccgacgacaagctgcagatctacagggac
aactttgaaaaagcctacatggattccaccgagcgcttctacagaacgcaggcgcccgct
tacctccagcaaaacggcgtccagaactacatgaaatacgctgattccaagctgagggaa
gaagaaaaacgtgcacttcgctacctggagacaaggcgtgactgcaactctgtacaagcg
ctgatggagtgctgcgtcaatgcccttgtaacggccttcaaggagaccatcttggccgag
tgtccaggcatgatcaagaggaatgaaacagacaagctgcacttgatgttctcgctgatg
gacaaagtgccaagcggaatcgagcccatgcttaaggacctggaggaacacatcgtgagc
gccggcctcgccgacatggtggcctccgccgagaccatcacctcggactcggagaagtac
gtggagcagctgctcacgttgttcaaccgcttcagtcggcttgtgaaagaggccttccag
gacgaccctcggttcctcaccgccagagacaaagcctacaaagccgttgtcaacgatgcc
accatctttaaattagaacttcctatgaaacagaaaggcgcgggcttgaaaacacaacct
gagtccaagtgtccagagctgctggccaactactgcgacatgctgctcaggaagacgccg
ctcagcaagaagctcacgtccgaggagattgaggccaagctcaaggaagtgctgttggtt
ctgaaatacgtccagaacaaagacgtgttcatgcgctaccacaaggcccacctgacgcgc
cgcctcatcctggacatctcggccgacagcgaaatcgaggagaacatggtggaatggctc
agggaagtggggatgccggcggactatgtcaacaagctggccaggatgtttcaggacatt
aaagtgtctgaggacctcaaccagtctttcaaagaaatgcacaaacacaacaagctggct
ctcccagccgactctgtcaacatcaagatcctgaacgccggcgcgtggtcacgcagcagt
gagaaggtgtttgtctcgctgcccacggagctggaggacttgatcccagaggtggaggac
ttctacaagaagaaccacagtggacgcaaattacattggcatcacctcatgtccaatggc
attatcaccttcaagaacgaggtgggccagtacgacctggaggtgacgaccttccagctg
gccgtgctcttcgcctggaaccagaggcccagggaaaggatcagcttcgagaacctcaag
ctcgccaccgagctacccgatgctgagctgcgacgcactctctgggtgaaaagcacacag
agagggactgaaaagacatttgaaaccgtcgtcattatgggactccttgttctgtgtact
tctcacgttcggcgtgtccccctcctccctctgttgcagtccttggtggcgttccccaag
ctgaagcggcaagtgctgtcgtacgacccagcggtgtcgtcgcccaaagactttgctgaa
ggaacgttgttctacatcaatcaagagttttcactcataaaaaattccaaagtccagaag
cggggaaagatcaacctgatcggtcgactgcagctcactacggagagaatgcgagaggag
gagaacgagggcatcgtgcagctccggatactgagaacccaggaggccatcatccagatc
atgaaaatgaggaaacgcatcaacaatgcacagctgcagacagagctcgtggagatctta
aagaacatgtttttaccacagaagaagatgatcaaggagcagatcgagtggcttatcgac
cacaagtacatcaagcgggacgaggccgacataaacaccttcatctacatggcatag

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