Syngnathus scovelli (Gulf pipefish): 125982511
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Entry
125982511 CDS
T08785
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1 isoform X1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125982511 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125982511 (lrwd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
LRR_8
Beta-prop_EML_2
WD40_CDC20-Fz
LRR_14
WD40
Motif
Other DBs
NCBI-GeneID:
125982511
NCBI-ProteinID:
XP_049599187
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All DBs
Position
15:9237054..9241635
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AA seq
668 aa
AA seq
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MCCLHIHLSKLGLTCPDLPVKLLSRLRSLERWDLSGNRLQEFPKSLELPELRFLDLSANQ
MEDVTSLASLRSLEEVKMEDNLYITVSDNYKLMTLLPKLRSYNGKDITSTANHVRFMFTE
NLRTKINALWRRSYNHPDPPAPEKTAVLEEDFVNAARKQVKYGPSSVSDFTKWKVEIMAR
EHLRSLTEPEEDVSNKTNVPIPAKRKPAPVLMDDDLRLTPRKRAQSDPSLAEEGLKKRTI
GGAGAAFALTPSRARARGEAAGEGTARSGVKEKTRDEATKSINKMQPVCLQPLHVLQCHS
KEDDPQDFSTQLWDCAFQPQPDLSGSRLVATCGGESLCVIECETGAVMKKYRVAGEEFFS
LAWSTVLMSRGPGALAQPVSILAAGGKRGLVKLIHPRCNVAYGELRVSRKALSVLRFDPR
QGNFLFTGCYDNRIVLWDIGGLDSEYKFKALQLLALESVSTPLHICLPPSGSDAQLLAAC
EDGLRLYDAMPAPAKRSDGVEITFPIYEKEDIEHNYRTVDGIAFLAGDVVASKNFTYDCI
YLWSWSQTRSQWPDKSGRMRAVVLAKLRWAQTEIPYLALNTCPGRSYVVCGDHEGKLWTY
HVADVETEHFHGEEPVEPTEVLRWPATVREGLCWREGPSINSVAMDPDLWYLVALSDKNV
VTVWKRAA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtttgcatatccatctctccaagctcggactgacatgtccagacttgccggtc
aagctgctgtcccgtcttcggtccttggagcgctgggatctttctgggaacagattgcaa
gagttccccaaaagcttagagctacccgagctgcgcttcttggacctcagcgccaaccag
atggaggacgtcacctctttggcatctctgcgcagcctggaggaggtcaagatggaggac
aacctttatattaccgtgagtgacaattacaagctaatgacgctgctgcccaaattgcgg
agttacaacggtaaagacatcaccagtaccgccaaccacgtgcgcttcatgttcaccgag
aacctgagaaccaagatcaatgccttgtggcggaggagttacaaccacccagaccctcct
gcgcctgagaaaacggccgttctggaggaggactttgttaacgcggcgcggaagcaggtc
aaatatggacccagttcagtcagcgacttcacaaaatggaaggtagaaatcatggccagg
gagcatctgcggtccctcacggaacccgaggaggacgtgtcgaacaagaccaatgttccg
atccccgcaaaaaggaagccggccccggtgctgatggatgacgatttgcgactgactcct
cgcaagagggcgcaatcggatccctccttggctgaggaaggcctcaaaaaacgcacgata
ggcggcgcgggagctgcctttgcattgacgccttcgcgcgcccgtgccaggggagaggcc
gccggtgagggaaccgctaggagtggagtcaaggagaagacgagggatgaggccacgaag
agcattaacaagatgcagccggtgtgtctgcagcctcttcatgtcctgcaatgccacagc
aaggaggacgacccgcaagacttctccactcagctttgggactgcgccttccaacctcag
cctgacttatctggaagtcgcttggttgccacgtgcggtggagagtctctgtgcgtgatc
gagtgtgagaccggtgcagtgatgaagaaatacagagtggccggggaggagttcttttcg
ctagcctggtctacggtgctgatgtcccgagggcctggagccttggcacagcccgtcagc
atcctggcggcaggtggaaagcgaggactggtcaagctgatccacccccgctgcaacgtg
gcctacggcgagttacgggtgagccgcaaggcgttgtccgtcctccgcttcgacccccgg
cagggcaacttcctcttcacgggctgttacgacaacaggattgtgctgtgggacatcggg
gggctcgacagcgagtacaagtttaaagcgctgcagctgctggcgttggagagtgtctcc
acgccgctgcacatctgcctgccgcccagtggatccgacgcacaactgctggcggcgtgc
gaggacggcctgcgtctctacgacgccatgccggctccagccaagaggtctgacggagtg
gagatcaccttccctatttacgagaaggaagacatagagcacaactaccgcaccgtggac
ggcatcgctttccttgccggcgacgtcgtagcctccaagaacttcacgtacgactgcatc
tatttatggagctggagccagacgcgatctcagtggcccgacaagagcgggcgcatgcgt
gctgtggtactagccaagctgcgctgggcccaaacagagattccttacctggcgctcaac
acctgtcccggtcgatcgtacgtcgtgtgcggcgaccacgaaggcaagctgtggacgtat
cacgtggctgatgtcgagacggagcatttccacggcgaggagcccgtggaacccacggag
gtgcttcggtggcccgccaccgtacgcgagggtctctgttggagggagggcccctctatc
aacagcgtggccatggacccagacctctggtacctggtggccctcagcgacaagaatgtg
gtgacggtgtggaagagggcggcctga
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