Syngnathus scovelli (Gulf pipefish): 125982542
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Entry
125982542 CDS
T08785
Symbol
rbpjb
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region b
KO
K06053
recombining binding protein suppressor of hairless
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125982542 (rbpjb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125982542 (rbpjb)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Other transcription factors
Others
125982542 (rbpjb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
125982542
NCBI-ProteinID:
XP_049599277
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All DBs
Position
1:29764704..29775338
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AA seq
483 aa
AA seq
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MAPVVTGKFGERPQPQRLTREAMRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSEQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVQAPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVREDG
LIYSTSLTFTYTPEPGPRPHCNAAGAILRAGNSATLLSGGGGPEAAVYGSAVTSSSATAA
VVS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacggggaagttcggggagcgccctcagccacagcgcctcaccaga
gaagccatgaggaattacctgaaggagcgaggggaccaaaccgtcatgatcctgcacgcc
aaggttgcacagaaatcctacggcaacgagaaaaggttcttctgcccgccgccgtgcgtg
tacctgatgggcagcggctggaagaaaaagaaggagcagatggagcgggacggctgctcc
gagcaagagtcgcagccgtgcgccttcattggcatcggcaacagcgagcaggaaatgcag
cagcttaacttggaggggaagaactactgcacagccaaaaccttgtacatatccgactcg
gacaagaggaagcacttcatgttgtccgtcaagatgttctacggcaacagcgccgacatc
ggcgtcttcctcagcaagaggatcaaggtcatctccaagccctccaaaaagaaacagtcc
ctgaaaaacgccgacctgtgcattgcgtcgggcaccaaggtggcgctcttcaaccgcctg
cgctcccaaacggtcagcacgcgctatctccatgtggaggggggcaacttccatgccagc
tcccagcagtggggagccttctacatccacctactggacgacgacgagtcggagggcgaa
gagttcaccgtgcgcgacggctacatccactacggccagacggtcaagctggtgtgctcg
gtcaccggcatggcgctgccccgactgatcatccgtaaggtggacaagcagacggcgctg
ctggacgctgacgacccggtgtcccagctgcacaagtgcgccttctacctgaaggacacg
gagcgcatgtacctgtgcctctcccaagagaggatcatccagtttcaggccacgccctgc
ccaaaggaacccaacaaggagatgatcaacgacggcgcctcctggacaatcatcagcacg
gacaaagccgagtacaccttctacgagggcatgggccccgtgcaggcgcctgtcacgccc
gtgcccgtggtggagagcctgcagctcaacggcggcggagacgtggccatgctggagctg
acgggccagaacttcacccccaatctgcgagtctggttcggagacgtggaggccgagacc
atgtacagatgcgccgagagcatgctgtgcgtggtgcctgacatttcagccttccgcgag
ggctggcgctgggtgcggcagcccgtccaggtgcccgtcacgctggtcagggaggacggc
ctcatctactccacctcgctcaccttcacctacacgcccgagcccgggccgcggccacac
tgcaacgccgccggcgccatcctgcgggccggcaactcggcgaccctgctgagcggcggc
ggcgggccggaggcggccgtctacgggagcgccgtcacgtcctcgtcggccaccgccgcc
gtggtctcctaa
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