Syngnathus scovelli (Gulf pipefish): 125982569
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Entry
125982569 CDS
T08785
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125982569
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
125982569
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GFIT
Motif
Pfam:
IFT57
DUF7615
SpoIIE_N
Spectrin_1st_PEPL
Sec10_N
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
125982569
NCBI-ProteinID:
XP_049599317
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All DBs
Position
1:complement(29829318..29831086)
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AA seq
434 aa
AA seq
DB search
MAQQQQQRQRRSDEDERGGPGAAYRPFVAMERLLDKLHILNYQDQVLAKHNMRNLSRHYF
VSSPYVESNPGEQFYMFGIIAAWLINAAGRPFHERADYGEPGAAVADILAELRALGVRVD
FPPSKLLSGSGEQVCFVLDRLAEEALKKRGFSFGSPEYPAEGSAGEAAAAEDARVNVVEE
EEEEEEQGEWRREEEAAADDEDEEQTPDLEALKLRSARPRAKVPCVNTEILQSMVDAAEW
YLEVERALPRLKVTVKNDNKDWRIHVEQMHRHRDGISSSFREAEGYLEKLREDIGKTLEK
VCSREKYVNNQLEHLIQDYRQAQAQLGRAKEQYRRASEGLTEKARVLADMDDELKRVKRE
TERRNSSVSDGAPLVTIKRCMTDQKQEMVLLDKMIASRRLQMKTGGGSLRHAHASVSPEH
TYFARASHTWIWDS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcagcagcagcagcggcagcggcgcagtgacgaggacgagcgcggcgggccc
ggggcggcctaccggccctttgtggccatggagcgcctgctggacaagctgcacattttg
aattaccaagaccaagtcctggccaagcacaacatgaggaacctgagcaggcattacttt
gtgtccagtccctacgtggagtccaacccgggcgagcagttctacatgtttggcatcatc
gccgcctggctcatcaacgcggcggggaggcccttccacgagcgcgccgactacggcgag
cccggcgccgccgtggccgacatcttggccgagctgcgggcgctgggtgtgcgggtggac
ttcccgccctccaaactcctgtcgggctccggcgagcaggtgtgcttcgtgctggacagg
ctggccgaggaggcgctcaagaagaggggcttctccttcgggagccccgagtacccggcc
gaaggctccgccggggaagctgccgccgccgaggacgcccgggtcaacgtggtggaggag
gaggaggaggaggaggagcaaggtgagtggcgccgggaggaggaggcggcggccgacgac
gaggacgaggagcaaaccccggacctggaggccttgaagctacgaagcgctcgtccccga
gccaaggtgccctgcgtcaacacggagatcctgcagtccatggtggacgcagccgaatgg
tacctggaagtggagcgcgccctcccgcgcctcaaggtcaccgtcaagaacgacaacaag
gactggaggatccacgtggagcagatgcaccggcaccgggacggcatctcgtcctccttc
agagaggccgagggctacctggagaagctgcgggaggacatcggcaagaccttggagaaa
gtctgcagccgggagaagtacgtcaacaatcagctggagcacctgatccaggactaccgc
caggctcaggctcaactgggccgggccaaggagcagtaccggcgagccagcgagggcctg
acggagaaggcgcgcgtcctggccgacatggacgacgagctgaagcgggtcaagcgcgag
accgagcggaggaacagcagcgtgtcggacggcgcgccgctggtcaccatcaagcgctgc
atgaccgaccagaagcaggagatggtcctgctggacaagatgatcgccagccggcgcttg
cagatgaagacgggcggcggcagcctgcgccacgcgcacgccagcgtctcgccggagcac
acgtactttgcgcgcgcctcacatacgtggatttgggattcctga
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