Syngnathus scovelli (Gulf pipefish): 125982586
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Entry
125982586 CDS
T08785
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125982586
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Other
125982586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
125982586
NCBI-ProteinID:
XP_049599348
LinkDB
All DBs
Position
15:complement(6616650..6649384)
Genome browser
AA seq
2057 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDVSSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVYANGTLQLYSFLPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIVPGNRFLLTSFG
ALYISDVQKEDALSTYRCITRHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVYAG
QSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRLEDSGSYACEVTNSF
GSKEVSGQLHIIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTINWYRNTEPIFPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTSQDFSIILLEDGTPRIVTSFSEKVVN
PGEPFSLVCEAKGAPPPSITWTLDDEPVVRDSIYKTSQYTQSDGLTVSHVNVSNPLIRNG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDMTAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVLFDNGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVSVKVPPLIQ
PFDIPSTSVGKLIYIACVVSSGDMPIRITWHKDGQLIVPGPTSGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPADRGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGRAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSLSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANP
EMLFYHITHLSRGKQYHIWAAAVTTAGRGNVSSKVIVEPAGKVPAKILSFGGTVTTPWMK
EVRLPCKSVGEPAPTIKWTKDSEDSAIPVTADSQRQIFSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQ
PLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTTQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTIG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPG
TNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPL
YMKTDPFFRKQGELHDPCPVVPPREASIRSLTQRAYHTQGRHKTLDSAKQQALTLGHSGL
GSLGASSGTATLPQRTLTMPSSNVAATASTSSTSSNPTNSSNKMGGSRDSLLESSSSALG
RLQKQSAGAYSKSYTLV
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggatgtg
agctctaccaggctgtactttgtgaacgcttccctgcagagggtaacctactccagctcg
gtgggggtgtccctaccctgtccagcagggggcacccccagtgccattctgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgccacgtgtacgccaatggc
accttgcaactgtactccttcttgccctccgcctacaacagttacatccatgacaacgac
tacttctgcactgccgagaaccaggcgggcaaaatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctacactgtgcgggtggcggaccagcgctctatgcggggcaac
gtagccgtgttcaagtgcctcatccccactgccgtgcaggagtacgtcagcgtcgtatcc
tgggagagagacacggtctctatcgtcccaggtaacaggttcttgctgacctcctttgga
gctctgtacatctcagatgtccagaaggaggatgccctctccacctaccgctgcattacc
aggcataaatacagcggggagacgcgccaaagcaatggagccaggctctctgtcatggac
cccaatgagtcctcacccaccatcctggacagttttcaagcaggggaggtgtacgccggc
cagagtatcgagctcccctgcatagcgggaggttaccccagcccgactgtgcgttggctg
aaagatggccgcccactcccctcggacgcccgctggacacggcgtttgacggggctgacc
atcagtgacctgcgactggaggacagcggcagctacgcatgtgaagtcaccaacagcttt
ggctccaaggaagtgtctggacagcttcacataatagatccacttcgagtgaccttatcc
cccaagaacctgaaaacgggaattagcagcacactcttcttcacctgcactgtggaaggt
tctccagaatacaccatcaactggtaccggaacacggaacccatcttccccgatcagcac
atctccatccagggtcaacacaacgacacactgcaaatcactgcggcgcaaaagttccac
tctggggcctaccagtgctttgcgtcccgcaagggccacacgtctcaggacttttccatc
attctgctggaggacggtaccccacggattgtcacgtccttcagcgagaaggtggtgaac
cccggcgagcctttctccctggtgtgtgaggccaaaggagcaccgccaccctccatcacc
tggacgctagacgacgaacccgtggtgcgagactccatctacaagaccagccagtacacc
cagtctgacggcctgaccgtgtcccacgtcaacgtcagcaacccgctcatccgaaacggg
ggagtttatcgttgcgtcgcacgcaactcggccggcagcgccgagtaccaagcgcgcata
aacgtaagaggtccaccccgaatcagacccatgcgagacatgacggcagtggctggcagg
aacacgtacattacgtgccgtgtcattgggtacccttactactccattaagtggctgaag
gacggcatgcagctgcccgataatcaccgccaagtgttgtttgacaatggcaccctgcga
ctaacggacgtgcagaagggcgccgacgagggcacctacctttgtagtgttctgatccag
ccccaggtgtcaatcaaccagactgtgcatgtttctgttaaagtgccacctctcatccag
cccttcgacatcccctctacctcagtggggaagctcatctacatagcctgcgtggtgtca
tccggggacatgcccatacgcatcacctggcacaaagacggccagctcattgtgccaggg
cccacctccggcgttgcgatcgagaccaaagagttcatgagctccctccaaatttccaag
gtgacattaaaacacaacggaaactacacttgcatcgccagcaacgccgccgccaccgtc
agctgggagcgacagctgattgttaccgtgccaccgcgttttgtggtgcaaccaaacaac
caggactgcatctacggcaaagctggagttctcaactgctcggtggagggttacccacct
ccaaaagtcatgtggaaacacgctaaaggtgtcggaaaccctcagcagtaccatccggtc
cctctcaccggtcgcatccagatcatgtccaacgggtcgctgctcatccgacatgtgctg
gaggatgaccgcgggtactacctgtgtcaggcctctaacggagtgggctcagacatcagt
aagagcatgatcctcactgtcaagatccccgcgatgatcaccagccaccccaacaccacc
atggccaggaagggccagaccaaggagttgaactgcacagctcgaggcgagcagcccatc
atcatccgttgggaaagaggcgacacggtcatcgacgccgagcgaaacccccgttattcc
atcaccatcaacaaaaagggagatgaagtcatctccaccctaaagctgaacccagcagac
agaggagattctgtcttcttctcttgtcacgccataaattcctacggagaaggtcgagga
ctcatccaactcactgtgcaagaaccgccggatccccctgaactggaagtaagagaggtg
aaggacagaagtatgaacctacgctggatccaaaggtttgacgggaacagcatcatcaca
agctatgacattgagtacaagaacaagtcagactcgtgggaccacatgtacacaaccagg
aacatctcacccaccaacaaccaagccaatattgtcgagctgcacccggcttgcgtgtac
agcatccgcatgtattcctacaacaagattggccggagccttccaagcaaagagctaacg
atcagtaccgaggaagcaccacctgatggaccaccaatggatgtgatcctgcagcccatg
acatcacagagcattcgggtcacatggagggcaccgaagaaggagctccagaacggtgtt
atccgcggctaccagattggctaccgagaaaacggcccaggcagcaacggccagtatagc
attgtggaaatgaaagctaccggagacagtgaagtatacaccctggacaacctcaagaag
tttgcccagtacggagtggtggtccaggctttcaacagagctggaacggggccttctagt
acggagatcaatgcaaccacgctggaagacgtacccagcgaaccgccgcagaacgtacga
gccatctcggtcacgtcagacgaggcggtgatcacgtgggcggagcctccacggctgacg
ctgcacggtgtgctgaaaggctaccgggttgtgttttggtccctcttccccgacggaggt
gggtgctgtgggggccgggcccaatggccaatgcagaagtggggagagatgcagaacatc
accaccacacgtgagcaggtggagctgcgaggactggagaaattcacaaattacagcgtt
caggtgctagcgtatacacaagctggcgacggagtccgcagcaacgtgctgtacatccaa
actcgtgaagatcttcccggtccaccggctggcatcaaggcagttccatcctctctgagc
agtgtggtcgtgtcctggttgcctccccacaaacctaatggtgtcatccgcaagtacact
atttactgctccagcccgggttctggacagccggcgcccagtgagtacgaggccaaccca
gaaatgctcttctaccacatcacgcacctgagccgaggcaaacaataccacatctgggcc
gctgccgtcaccaccgccggccggggcaacgtgagctcaaaggtcatagtggagccggcc
gggaaagtgccagccaaaatcttgtcctttgggggaacggtgaccacgccctggatgaag
gaagtacgtctgccctgcaagtctgtgggggagccggctcccaccatcaaatggaccaaa
gacagtgaggactcggccattccggtgaccgctgacagtcagcggcagatcttctccaat
gggacactcgtgctgcgttcagtcaaagcagaagattcgggctactacacgtgtacggcc
accaacacgcttggttttgacaccatcattgtcaatctcgtagtgcaagttcctccagac
cagcctcgcctgactgtctccaccacttccacctcctccatcaccctggcttggatcccg
ggggacaacggtggaagttccatcagaggctttgtgctgcagtattcagtggacaacaca
gaggagtggagggacgtttttatcagttccagcgaacgttccttcagattggacaatcta
cgctgtggaacatggtacaaggtcaagctggcagcaaagaacagtgtgggctcagggcgc
atcagtgagattattgaagccaaaacacacggaagagagcccgtgttcaacaaggaccag
ccgctgctcacccacatcaactcgacccacgcaggcctcaacctgcagggttggaccagc
ggcggctgccccatcactgatatgatgctggacttcaggcctaaaggcacttgggcttgg
cagagcctcaaagccaactccaccactcagctattcctcagtgagctacgggaggcaacc
tggtatgagctcaaaatgaaggcctgcaacagtgccggctgcggcaaccagagttcccag
tttgccaccaccgattacgatggaagtacaatccctcccatcaaatccgcccgcggcgag
ggtgacgatgtgaaaaagttgttttccatcggctcgcctgtcatcctggtcaccatcggt
gttgccctgctcttcattatccgcaagaagcgtaaagagaaaagactgaaacgacttcga
gatgccaagagcctcgctgagatgctcatcagtaagaacaatcggagtattgacactcct
gtgaagggcccgccgcaggggccacggctccacattgacattcctcgtgtgcagctgctc
attgaggacaaggaaggcatcaaacaaatcggagaggacaaagctgcggtgccagtgaca
gacacagaattcagccaatcagtcaacccgcaaaacttctgcacaggcgtgtctcttcac
catcaagccctcatccaaaattccggacctttgattgacatgtccgatatccgacccggc
acaaaccccgtttccagaaagagcatcaaatccgctcacagctccagaaatagatactcc
agccagtggacgctcagccgacccagtcagagccagtccacggcttccgcacgaactctg
acctcggattggcggaccatggggtctcatggcatcaccgccactgagagcgacagctac
agcgccagcctttctcaagacacagataaggggcgtaacagcatggtgtctacggagagc
gcctcgtccacctacgaggagctggccagggcgtacgagcacgccaagctggaggagcat
ctgcagcacgccaagttcaccatcacggagtgcttcatctccgacagctcttctgaccaa
atgaccacaggcaccaacgacccggccgacagcatgacctcgctgagcacgccgtccgag
ccgggcatctgccgcttcaccgcctcgcctcccaaaccgcaggactatgaccgtggtaaa
aatgtagctgtgcccattcctcatcgcgcaaacaaaagtgaattctgcaacctccccctt
tacatgaagacggatcccttcttccgcaagcaaggggagttgcacgatccgtgcccggtc
gtgcccccgcgggaggcatccatccgcagcctgacgcagcgtgcgtatcacacgcagggg
cgccacaagactctagactctgccaagcagcaggcgctgacactgggccactcgggactg
ggcagcttgggcgccagctcgggcacagccaccttgccccagaggactctcaccatgccc
agctccaacgtggcggctaccgcctccacatccagcacgagcagcaaccccaccaacagc
agcaacaagatgggcggctccagagactcgctgctggagagcagctcctccgcgctgggc
cggctgcagaaacaaagcgcgggggcttactccaagtcctacacgctggtttag
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integrated database retrieval system
