Syngnathus scovelli (Gulf pipefish): 125982624
Help
Entry
125982624 CDS
T08785
Symbol
zbtb20
Name
(RefSeq) zinc finger and BTB domain-containing protein 20
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125982624 (zbtb20)
04121 Ubiquitin system [BR:
sscv04121
]
125982624 (zbtb20)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125982624 (zbtb20)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125982624 (zbtb20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zf-C2H2_ZNF451_2nd
BTB_KLHL33
zf-C2HC_2
zf-C2H2_15
zf-met
zf-C2H2_6
BolA
zf-C2H2_jaz
zf-C2H2_11
zf-Di19
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
125982624
NCBI-ProteinID:
XP_049599419
LinkDB
All DBs
Position
15:complement(7280918..7310925)
Genome browser
AA seq
682 aa
AA seq
DB search
MTERIHNINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEIPSVVSVQSIQKLIDFMYSGILRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGLAGPGGFPVIPGDSGQDTPRGTPESATSGPSSDAESGCMQTSTQQNADRAYTSLY
SYSGLSNGTRERSLYINPLTSNYDPSAGAQKDQQSQDPPWMNRIPDRSQPVERFISTAES
TTHCRKQPRPVRLQTGGMHIKQEAEDEYGCFNNVGDCQVENDHTEGVVSESKVESFDSGV
SSSISTEPDAMDQQPYLSFNREGGGEGPHGEGGPVQIEVNDSSPEQAQEPDEGDQSHSTS
DSTMMHPLANPIMSQSLASTPHYLRQVESHTSNLRMPHAVTSNSQVLGAGNTFLPTLFPP
QPTRDSKSFIYLPGQQQAQFVTVPPPAIPSFPNAMAVPPTPSQQQQQAMGQGEKKPYACT
LCCKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNK
RFTQKSSLNVHMRLHRGEKSYECVICKKKFSHKTLLERHMALHSTGSALAGLTGPAGTPG
PVSIPVSIPIPLPMAEPGAGVVALAMPVSGGAGEGPGVPTGVGVAAEASCQDGTTYMCSV
CPVKFDQMEHFNDHMRMHVSDG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcgcattcataacatcaatctccacaacttcagcaattctgtacttgagacc
ctgaacgagcagcgcaaccgtgggcacttttgtgatgtgactgttcggatccatggaagt
atgctgcgagctcaccgctgcgtgctggccgctggaagccccttctttcaggacaagcta
cttttgggctacagcgacattgagatcccctcggtggtctcggtgcaatccatccaaaag
ttgattgactttatgtacagcgggattctgcgagtgtctcagtcggaggccctgcagatc
ctaactgccgccagcatcttgcagatcaagaccgtcatcgatgagtgcactcgcatcgtg
tcccagaatgtgggcctggccggcccgggaggcttccccgtcataccgggagactcgggt
caggacaccccccgcggcacgcccgagtcggccacgtccggcccgagcagcgacgccgag
tcgggctgtatgcaaacgtcaacccagcagaacgcggatcgagcgtacacgtcgctctac
tcctactccggcctctccaacggcacccgcgagcgctcgctttacatcaaccccttgacg
agcaattacgatccgagtgccggcgctcagaaagaccagcagtcgcaggatcccccctgg
atgaaccgcatcccggatcgaagccaaccggtggagcgcttcatctccacggccgagtcc
accacgcactgccgcaagcagccccgaccggtacgcctacaaacaggtggcatgcacatc
aagcaggaggccgaagacgagtacggctgcttcaacaacgtaggggactgccaggtggag
aacgaccacaccgagggcgtggtgagcgagtccaaggtggaaagttttgactcgggcgtc
agctcctccatcagtaccgaaccagacgccatggatcagcagccctacctgagcttcaac
cgggaagggggcggtgaaggccctcacggggaaggcggaccggtgcagatcgaggtcaac
gactcgtccccggagcaagcgcaggagcccgacgagggcgaccagagccacagcactagt
gatagtaccatgatgcatcccctggccaaccccatcatgtcccaatccctggccagcaca
ccgcactacctgcggcaggtggagtcacacaccagcaatctccgaatgccgcacgccgtg
accagcaattcccaagtgttgggcgccgggaacaccttcttgcccacgctcttccccccg
cagccgaccagagacagcaagtctttcatttaccttccgggccagcagcaggcccagttt
gtgacggtgccgccccctgccataccatcattccccaacgccatggccgtgcccccgacg
ccatcccagcagcagcagcaggcaatgggtcagggggagaagaaaccctatgcatgcact
ctctgctgtaaaacctttactgcaaaacagaactacgtcaaacacatgtttgtgcatact
ggagagaagcctcaccagtgcagcatctgctggcgctccttctccctgaaggattactta
atcaagcacatggtgacccacacaggggtgcgagcctaccagtgcagcatctgcaacaag
cgcttcacccagaagagctctctcaacgtccacatgcggctgcaccgtggcgagaagtcc
tacgagtgtgtcatctgcaagaagaagttctcccacaagaccctgctggagcgccacatg
gccttgcacagcacgggcagcgccctggccgggctgacgggccccgccggcacccccggc
cccgtctccatccccgtctccatccccatccccctccccatggccgagcccggcgccggg
gttgtggccctcgccatgcccgtgagcggaggagcgggagaagggcctggggtcccgacg
ggagtgggcgtggcggcggaggccagctgccaagatgggaccacctacatgtgttccgtc
tgccccgtcaagttcgaccaaatggagcacttcaacgaccacatgcgaatgcatgtctct
gacggataa
DBGET
integrated database retrieval system