Syngnathus scovelli (Gulf pipefish): 125982627
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Entry
125982627 CDS
T08785
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125982627 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125982627 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125982627 (ncor1)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125982627 (ncor1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
125982627 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125982627
NCBI-ProteinID:
XP_049599426
LinkDB
All DBs
Position
15:4115354..4142393
Genome browser
AA seq
2382 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPSHSVQYTFSGTRHQQDFSVPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSITTQAEHEALETKRPRMDSISEAHITRTSSSAGNILL
PMHNTLQDSLRATVEVKKESPFSVKVECPSPGGPTLHLGEEHDTSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKDKFVQHPKNFGLIASCLERKCVADCVLYYYLTKKNNNY
KTLVRRNYGRRRGRNQQITRPAQEEKSEDKNEEDKSEKSEKKEDEEKKDEEEKDEKEESR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAATMAAEEAPPPA
SEAAVPDPPQIPKSDTAQKSIKEPSKPPTPVASLDTKAGVGETGETSRWTEEEMEVAKKG
LVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGL
TTASPDDDDDNADDSEGGDNSSDTESAPSPSQTDPTKSGESKRSENASGDAQSSDQDTVP
VSNAKTSDPSYGGLRVKEEKSPEAEPGSHEEKSRVTSCSGVVHPKTEPQDMDMKAGEVQV
KMEPETKEKEHSERPKELHSDNDSSATCSADEDVEAEPERQRILSMDKPSLLNPPGTVLV
SSPKQNPHNIQQMHQRAAAIPPMVPGPYGHNPVPISGFAMLQHQIKAAHASAHQEEKQRQ
DQAELERRLPFNTRSPSLIDRDGKPLTYNPYDMMLALDQDALSGRPGSPYRLSPRNLSKS
SPQPDPNIPNAFRYNVPPVLHPAPNQLIQSLPEGPRMAFGRPSRPPNIPSPPPLIPTTKP
TDKPSFIHGGSISQGTPGTYLPSHAIYGPDGSKNTVGSISLGLPRHQDPNKSVSTIHDGR
GNPSKISENLTFRGSITQGTPALSQSTVAADLLKGTITKLATEDLSNSDKTRDQLAKGHV
IYEGKSGHILSYDAIKNPRETTRSPRTSHDLKRTYEMMEVPISRGHPGREGAPFEGLISR
ALPREGLHGDSKDRQIITGSIMQGTPRTAAEAYEDVIKYGKQIKRESPPIRSFDGGIGKG
KPYEGVNTIKETGRSIHEIPRQDQSGQDLRKTPDLSDRRVIEGSMSQMHSLNQPTIKHNV
KSLITSPSKLPHGLPQHEVMERSKYEESKAVRHTSVVNSTTSVLRSTHQEAAKSQLSPGM
YEDANARRTPVNYSTSSVTRGSPMLGRSSDGTKSSSHERKNAMTPTQRESVPAKSPVTGG
DPRASHSPFDPHHRPVVPGEVYRAHLPPHLDPSIAFHRVIDPAFMFPRQPSPTGYHNTYQ
LYTMENTRQTILNDYITSQQMQVIPRPDMARGVSPREQPVSIPYPAGARGIIDLAQMPPT
ILLPHPGGTGTPTLERIAYLPGAQPPFTTRAFNPTSISPGHQAHLAAAAAAAASVERERE
RDREQQEKEREKEREQRDREMRERDRERERANEYIRGSGVEQPGRPGSRGYLHSPSPSLR
MQEVVVQQQRPSIFQGKSVITSLMPHSAAATTVAQSNSRYSTAADALAALVDIAASAPPV
DVAKAKENKRDERDDEMCSTARRATSITEQQQEPDRRSAPYGAISLPGGKPHPGYPEGLG
VKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIITRQIASEKDTRERGSQSSDSSSSLS
SNRYDNTGGGAIEVISPASSPVHSQQEKTDEGQHTAAAMRVYDMSRYRPSADPPQPSSQQ
PPTSQADSYSQIPKTHRVMTLADHISHIITQDFARNQDPPAVSSSASATFQSTMPPTSSS
SRVKGPSRYSPENQIQAPNHHRPSSRVSPENTADKPRSRPGKSPERGGRQMENYEPISPP
QSYQTMDKQETGGPAPQRRETDTSEIRNDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEI
FRKLNSTSGVGDSDVGNAQPGTEIFNLPAVTSSSNINPRNHSFSDPANNLGLEDIIRKAL
MSNLEDRTEEHQGSNTSGDTRQEANPSPSIVKQKQSKANSRKSKSPNLGQAYSGGDRPSS
VSSVHSEGDYHRQAQAQSQWSWDDRPSSAGSMQFPYNPLTMRIMSSTPPTSISSPSIQSQ
QQQQQQQQAPQQPLSAGAPVGQQRVWQSLLSEQYEALSDSDD
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctctggctatccccctagccaggggagcttcagcagcgagcagagccgc
tacccatcccattctgtccagtacacattcagcggcacgcgtcaccaacaagatttttcc
gtcccagattatcgtactcacatgcaagatccgcagggtcgaagaagaccatctttacta
tcggaattccaccctggtaccgaaaggcctccagagagacggcatggatacgaacagcag
tttcactccatcactactcaggctgaacatgaagccctggagaccaagcgcccacgcatg
gactctatttctgaggcccacatcactcgtacctcttcttccgctgggaatattctcttg
cccatgcacaatacactacaggatagccttagagccactgttgaggtgaaaaaggagtcg
cctttcagtgtgaaagtggagtgcccttccccaggaggacctacgttacaccttggggaa
gaacatgacacgtctccttccaagctatccaaggaggagctgattcagagtatggaccgg
gtggacagagagattgctaaagtggagcagcaaattttcaagttgaagaaaaagcaacaa
caactggaggaggaagcagcaaagcctgtggagccagaaaagccagtgacccctccccca
gtggaacataaacaccgcagcatagtccaaatcatctacgatgagaacagaaaaaaagcg
gaagaggcccacaagatactggaaggcctcggacccaaggttgaactgccgctgtacaat
caaccttcagacacaaaagtctaccatgaaaacataaaaaccaatcaggtcatgaggaag
aagctgattctattttttaagaggcggaaccatgctcgtaaacaaagggaacagaagatc
tgccaacgttacgaccagctgatggaagcttgggagaaaaaggtggagcgcatggagaac
aatcccaggcgcaaagccaaggagagccgaacccgggagtactatgaaaggcaattccct
gaaatccggaagcagagagagcagcaggagcgcttccagagggttggccagagaggaaca
ggactctctgcgacaatcgctagaagcgagcatgagatttcggaaattattgacggtctt
tctgagcaggagaacaatgaaaaacagatgagacagctgtccgtcatccctcccatgatg
tacgactcggagcaaaggcgagtgaagttcatcaacatgaacggcttgatggacgacccc
atgaaggtgtacaaagcccgacagttcatgaatgtttggactgaacacgaaaaagaaatc
ttcaaagacaagtttgtccagcacccaaagaactttggcttgatcgcttcctgtctcgaa
agaaagtgtgttgctgactgtgttctgtactactacttgaccaagaagaacaacaattac
aagacgctagtgagacgcaactacgggagacggaggggaaggaaccagcaaataacacgc
cccgcgcaagaagagaagtccgaagataaaaacgaagaggacaaatcggagaagtctgag
aaaaaagaagacgaagaaaagaaggacgaggaagagaaagatgaaaaggaggagtcaagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacgggaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgacgtaagggaaggatcacc
acacgctccatggccaatgaggctgccactatggcggcggaggaagcacctccccctgct
tcggaggctgccgtgccagatcctccgcagatccctaaatctgacacagctcagaagtcc
attaaggaacctagcaagccgccgactccagtagcttcactggatacaaaagctggtgtc
ggcgaaactggagaaacttctcgctggaccgaggaggaaatggaggtggccaaaaaaggt
ttagttgagcatgggcgaaactggacggccatcgccaaaatggtgggcaccaaaagtgag
gcgcagtgcaagaacttttatttcaactacaaacgacgacacaatctggataatctactc
cagcagcataaacaggacacacggcgggctcgtgccgataggtctcaaggtgaaggtctt
accacagcttcgccggatgacgatgacgacaatgcagacgacagtgaaggaggtgacaat
agctctgatacagagagcgctccttccccctctcaaacggacccaaccaagtccggtgag
agcaagagatccgaaaatgcttctggagatgctcagagttccgatcaggacacggtccca
gtcagcaatgctaaaacctcggacccctcatacggaggcttgcgtgtcaaggaagagaaa
agcccagaggctgaacctggttcccatgaggaaaagagcagagtgacttcctgttctggc
gtggtccatccaaaaacggaaccccaagatatggacatgaaagctggagaagttcaggtt
aaaatggagcccgagaccaaggagaaagaacacagcgagaggccgaaggagctccactcg
gataatgactccagcgccacctgcagcgctgatgaagatgtggaagcagagcctgaaaga
caaagaattctttccatggacaagccgtctttgctcaaccctcccggcaccgtcctggtg
tcctcacccaagcaaaatccgcacaacatccagcagatgcatcagcgggcggccgccatt
ccaccaatggtacctggaccttatggccataatccagtgcccatcagtggttttgccatg
ttgcaacaccagatcaaagcagcccacgcgtctgctcaccaggaggagaagcagcggcaa
gaccaggctgagctggagcgcagattgcccttcaatacccgtagcccaagtctgattgac
agagatggtaagcccttaacctacaatccttatgacatgatgttggcactggaccaagat
gccctttctggtcggccaggctctccttacagactgtcccccaggaatctaagcaagtcc
tcaccccaacctgaccccaacatccccaatgctttccgctacaatgtgccgccagtcctt
catccagctccaaatcagctcatccagagtctgccagagggaccacggatggctttcggc
agacccagtcgacctcctaacattccctcgccgcctcctctcattccaaccaccaaaccc
accgataaaccgtccttcattcacggaggttcaatatctcagggaaccccgggcacatac
ctgccttcacatgccatttacgggcctgacggaagtaagaacacagtgggctccatctct
ttgggtctgcctcggcaccaagatcccaacaagtctgtttcaacaatacacgatggtaga
ggaaatccatcaaaaattagtgagaacctcactttcagaggatcaatcactcagggcaca
ccagccctttcccaatcaactgtcgctgctgacctgctgaagggcaccatcacaaaacta
gccaccgaagatctgagtaactctgacaagactcgggaccagctggctaaaggtcatgtt
atttatgaaggcaaaagtggtcacatcctctcttatgatgccatcaaaaacccaagggaa
acgactcgtagtcccagaactagccatgacttgaaacggacttatgagatgatggaggtg
cccatcagcagaggccaccctggcagggaaggagctccatttgaaggtttgatcagcaga
gctttgcccagagaaggtctccatggagattctaaagaccgacaaataatcaccggctct
atcatgcaaggaacaccaagaactgccgcagaagcatacgaagacgttatcaaatacggg
aaacagattaaacgagagagcccacctatccgctcctttgatgggggaattgggaaagga
aaaccctatgagggagttaacaccattaaagagactgggcgctccattcatgaaatccct
agacaggaccagtctggccaggatctcagaaagacccctgacctatcagacaggagagtc
atagagggttccatgtctcagatgcactctctgaaccagcctacaatcaagcacaatgtt
aagtccctcatcaccagtcccagtaagctcccccacggtttaccccaacacgaggtcatg
gaaagaagcaagtacgaggagagcaaagcagtgcgccacacctcggtggttaactccacc
acctcagtcctgcgctccacacaccaggaagctgcaaaatctcagctcagcccaggcatg
tacgaggacgccaacgctcgtcggacccctgtgaactacagcaccagttctgtgaccaga
ggttcacccatgctggggcgttcatcagatggaaccaaatctagttcacatgaaagaaag
aacgccatgacacccactcagagagaaagtgtcccagccaagtctccagtaacgggaggc
gaccccagggcttctcacagccccttcgaccctcaccacaggccggttgttccaggcgaa
gtctaccgagcccacctgcctccacacctcgaccccagtattgccttccatcgagtgatc
gatcctgccttcatgtttcctaggcaaccgtctccaactggctaccacaacacataccag
ctctacaccatggagaacacacggcagaccatcctcaacgattacatcacgtctcagcag
atgcaagtcatccctcggcccgacatggcccgtggggtgtcgccacgggaacaacctgtt
tctatcccgtacccagctggagctcgagggataattgatctagcccagatgcctccaact
atcctgttgcctcaccctgggggaacaggtactcccactttggaacgtatcgcctacctc
cctggagctcagccccctttcactactagggctttcaacccaacctccatatcgccaggt
caccaagcccacctggctgctgcagccgccgccgccgcgagtgtggagagggagcgagaa
cgtgaccgtgagcaacaggagaaggaacgggaaaaagaaagggagcagcgggatcgagaa
atgcgagaacgcgatcgggaaagagagcgagccaacgaatatattcgtgggagtggagtt
gagcaaccaggccgaccaggaagtcgaggctatctgcattctccttccccttcgctcaga
atgcaggaagtggttgttcagcagcagcgaccaagcatctttcaggggaagagtgtcatc
acttctctaatgccacattcagcagcggcaacaacagtggcccagagtaactctcgctac
agtacggcagctgacgctctggctgctttggtggacatcgcagcctcggccccacccgtg
gacgtggccaaagcgaaggagaataaacgggacgagcgcgatgacgaaatgtgttcaacg
gctcggagagcgacgagcatcacggaacagcaacaggagcccgataggcgatcggcacca
tacggtgctatatctctgccaggagggaaacctcacccggggtaccccgaggggcttggc
gttaaggataagggaccgcaaacctcaaagtcccgcattgaggaagagcttcgaacccgg
ggaaaaacaaccatcacggcggctaacttcatcgatgtcatcatcacccgacaaatcgcc
tcggagaaagacaccagagagcgaggctctcagagctccgactcctcaagtagcttgtcc
tcaaaccgatacgacaatactggtggtggagccattgaagtgataagtcctgctagttcc
ccagtccattcccaacaggaaaaaacggacgaagggcagcacacagcagctgccatgcgg
gtttacgacatgagtcgataccggccttcggcagatccgccccagcccagttcacagcag
ccccctacgtcccaggctgacagctattctcaaatccccaagacacatcgggtcatgacc
ttggcagaccacatttcgcatattataacccaggactttgctcgcaatcaagaccctcct
gcagtttcctcgtcagcctctgccacattccagagcacgatgccacccacgtcttcgtcg
agccgagtcaagggtcccagccgctacagccctgaaaatcaaatccaggcgccaaaccat
caccgtccctccagcagggtttccccggagaacactgcagacaaacccagatccagacct
ggtaagtctccagagagaggtggcagacagatggagaactatgaacccatctcaccgcca
cagagctaccaaaccatggataagcaggagactggtgggcctgcaccccaaaggcgagag
acggacacctctgagatcaggaatgactcgaggtcccctggcagtgtcagttacctgccc
tccttcttcaccaaactagagaacacttcacctatggtgaaatccaaaaagcaggagatc
tttcgtaagttgaactccacatctggtgttggtgattctgacgttggaaatgctcagccc
ggcacagagattttcaacttacctgctgttaccagctccagcaacatcaaccctaggaac
cactccttcagtgaccccgccaataacttgggcctagaagacatcatccgtaaagcctta
atgagtaacttggaggaccgaacggaggagcaccaaggttccaacacgagcggtgacacc
cgccaggaggccaatccttcgccgagcatagtgaaacagaagcagagcaaagcaaacagc
cgtaaatcgaagtctcctaacctgggtcaggcctattcgggaggggatcgcccctcctct
gtgtcctccgtacactccgagggagactaccacagacaagcacaagcccaatcgcaatgg
agttgggacgaccgaccctcatcggcagggtccatgcagttcccttacaacccgttgacc
atgcgcataatgagcagcacgccacccacgtcaatatcttccccctccattcagagccag
cagcagcagcagcagcaacagcaggcaccacagcagccgctttctgctggagctccagtg
ggccaacagcgcgtgtggcagtctctgctgtcagagcaatacgaagccctgtcggacagc
gatgactga
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integrated database retrieval system
