Syngnathus scovelli (Gulf pipefish): 125982768
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Entry
125982768 CDS
T08785
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125982768
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
125982768
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_CCN
TSP1_ADAMTS
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
125982768
NCBI-ProteinID:
XP_049599722
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Position
15:complement(1113015..1117836)
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AA seq
894 aa
AA seq
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MPRAVSFLSLLLGLTGYALAGLNIWPSFHVALSNASVFVDYSTKTNSSLIGHLSVSLIDM
NTNTSLLTRTLPNNQSAGRVEFSCSCFLYAGTFRFLLKQISTAEESHANRTERSESTAWW
WSSELQVQWPTFHIAVERVGNHSGAFQIGLSTNEHFQPCSSILQPALLLEVSYMEYNQIG
RKGINKVQARTLHPIQPLRSQMIKLPCAFPFTEKDFIQVSLRSPHSTQEVKSSGPLYLSH
IFSYKLLVENANTYKSRCEGTVTVKLVTPPCAHIDGKVLLYKDRVVGRGVAVPSGTAGAG
GTTPMGFGQEEPSSPPLAFNWLTQGENETEFNCSVFSPGRSKYCFRFVFNYSRSPSPAQT
CLVVHRSEESWGPWKQWSVCSVSCGEGVRERVRECLLPSGVEGKQCTGMVKEQSLCSLED
CAAFAAPSPSLPPVPAGVGPFGGNMVAIVGISLCLVVILATVVITLWRKLCRTPQCSSVR
RGSAHSPGGRKLSDETSICGAGLQRPSSVGVGSTQIHRPSLGGPPLPQTAVMPLSQDPER
LSPTGQKVLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTSLEKPTSPTNSHI
PSPIASSFSEPPSQTSRITLDRPGPRVDLILGPQVSKWRDRTADWVEMVERSSVAGVADR
PMTNPYHKNPNFRRTSSFTEAKPQSSSAGYYRDRSMTQVGCRTLPEGNSWSKERRERSPF
SAYPIPEHDTPKWAHSRPQRDPSIQTSTPYQVKHTGTSTSKHVDHCGVGEKQPRGAAGSR
APHEGISGIGGPLSNPDCQYGANLSVERAELNWNRRGPSPVQRNMLARKLKEAQSCSSVR
GRQRSSTFSVSSSEKREEHGRPRPGSGYYGGTESSAYALSEAEQRVLRLSPDES
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagctgtctcctttctttctctgttgcttggcctcacaggatatgctttggca
gggctcaacatctggccctccttccacgttgcccttagcaacgccagtgtattcgtggac
tacagcacaaaaaccaacagcagcctcatcggccatctgagtgtatctctgattgacatg
aacaccaacaccagcctcctgactcggactctgcctaacaaccagtctgctggtagggtg
gagttcagctgctcctgtttcctgtatgctggaactttccgcttcctgctgaagcagatc
agcacggcggaggagtcccacgcaaataggacggagcgttcggagagtaccgcatggtgg
tggagttcagaactgcaggtgcaatggcccacctttcacattgcggtcgagagggtcggg
aaccactcgggagcttttcagatcggcttatcaaccaacgaacacttccaaccttgctcc
agcattctccaacctgctctgctgctagaagtcagctatatggaatacaaccagattggc
cgaaagggcatcaataaggtgcaagcccgcacgctccatcccatccaacctctccgttcc
cagatgatcaagcttccctgtgcttttccattcacggagaaagacttcatacaagtctcc
ctgcgctccccccattcaacacaggaggtgaaaagctctggtcctctctacctgtcccat
atcttctcctataaattgctcgtggaaaacgccaatacctacaagagtaggtgtgaaggg
actgtgaccgtgaagctcgtaactccaccttgtgcgcacattgatggcaaagtactgttg
tataaggacagagttgttggaagaggggtcgccgtcccctctgggacggcgggagcagga
ggaacaacaccgatgggcttcgggcaagaggagccgtcttctcctccgttggcttttaac
tggctcactcaaggagagaacgagacggaattcaactgctctgttttttccccgggaagg
agtaagtactgcttccggtttgtgtttaactacagccgctcgcctagtccggctcagacc
tgcctggtggtgcacaggagcgaagaatcatggggaccctggaaacagtggagtgtgtgc
agtgtgagctgtggagaaggtgtaagggaacgtgtgcgggagtgtttgttgccctctggc
gtggaagggaagcagtgcactggaatggtgaaggaacagtccctctgctccctggaagac
tgtgcagcatttgcagctccgtctccatcccttcctcccgtgccggctggagtcggtccc
ttcggtggcaacatggtggccatcgttggcatctccctctgcctggtcgtcattctggcc
accgtggtgattaccctgtggaggaagctctgccgtacccctcagtgcagctccgtccgt
agaggctccgcgcactccccgggtgggcgcaaactctccgacgagacctccatttgcggc
gccggcctccagagaccgagctcggtcggcgtcggttcgacccagatccacaggccttcc
ctgggcggtcctcctcttcctcagacagcggtgatgcctctctcacaggatccagagagg
ctgtcacccactggtcagaaggtcctgcctcccatttttgggtaccgtttagctcagcag
cagttaaaagaaatgaagaaaaagggcttaaaggaggccacgcaactctaccacgtgtcc
tcaagcccggttcacgatacttcgctagagaagccgacgtcaccgaccaattcccacatt
ccatcacccatcgcgtcctccttttctgagccaccgtcgcaaacttctcggatcacgctg
gaccgaccgggtcccagagtggatctcatcttgggtcctcaagtatccaagtggcgagac
cgcactgccgattgggtggagatggtggagaggagtagcgtagcaggtgttgccgacaga
cccatgacaaacccgtatcacaagaatccaaatttccgcaggacctccagttttacggag
gcaaaacctcagtcttcatctgcggggtactaccgagacagaagcatgactcaggtggga
tgtcggacccttcctgaaggaaactcatggtccaaagagagaagagagaggtctccattt
agcgcttaccccattccagagcatgatactccaaagtgggcccattctagaccccagagg
gatccctcaatacagacttccactccttatcaagtgaaacacacgggaaccagtacctcg
aaacacgtggaccactgtggcgttggggagaaacagccgaggggcgcggcaggaagcaga
gctcctcacgagggaatttcagggatcggcggcccactctcaaatcctgactgtcagtac
ggagcaaacctgagtgtggaacgggccgagctgaactggaatcgccgcggtccgtcgccg
gtccagaggaacatgctggcacggaaattgaaggaggctcagtcctgctccagcgtcaga
gggcgtcagcggagctccaccttcagcgtgtcgtcatcggaaaagagggaagaacacggc
agaccgcgtcccggttcgggatactacggcggcactgaaagctccgcttacgccctgagt
gaggcggagcaacgggtgctgcgtctttcaccagacgagagttag
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