Syngnathus scovelli (Gulf pipefish): 125982784
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Entry
125982784 CDS
T08785
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125982784 (gabra1)
04082 Neuroactive ligand signaling
125982784 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125982784 (gabra1)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125982784 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
125982784
NCBI-ProteinID:
XP_049599754
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Position
15:1597922..1618387
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AA seq
456 aa
AA seq
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MCERGSVASLCLGACLLIAHIVLGAKSTGQDSEHNTTVFTKILDSLLDGYDNRLRPGLGE
RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWT
PDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLK
FGSYAYTRAEVVYVWTKGADQSVVVADDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTH
FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESMLK
KNNTTAYPAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSKI
DRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTSH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaacggggcagcgtggcctcgctgtgcctgggggcttgcttgctcatagctcac
atcgtcctgggagccaaaagcactgggcaggacagcgagcacaacactacagtgttcacc
aagatcctagacagccttctggatggctatgacaaccgcctgaggccgggactaggagag
cgtgtaactgaagtcaagactgacattttcgtgactagtatcgggccagtttcggaccat
gacatggagtacaccattgatgtattcttcagacagagctggaaggatgagaggttaaag
ttcaaaggtcccatggccgtgctgcgtctcaacaacctgatggccagtaaaatctggacg
cccgacacgttttttcataacggcaaaaagtctgtggcccacaacatgaccatgcccaac
aaattgctgcgcatcacagaagaaggaactctgctctacactatgaggctgactgtgaga
gctgaatgccccatgcaccttgaagacttcccaatggacgcccatgcctgcccactcaag
tttggcagctatgcttacactcgagcagaagtggtgtatgtgtggaccaaaggggccgac
cagtctgtggtggtggcagatgacggttcaaggttaaaccagtacgatctgatgggacaa
agcgtggattctggagtggtgcaatccagcacaggcgagtacgtggtgatgacgacccac
ttccacctgaagaggaaaattggctactttgtgattcagacatatctgccctgcatcatg
acagtcattctctcgcaggtgtccttctggctcaacagagagtccgtccctgccaggact
gtctttggagtgacgactgtcctgaccatgactaccctcagtatcagcgccaggaattcg
ctccccaaagtggcctacgccacggctatggattggttcatcgccgtgtgctacgccttc
gtcttctcggccctaattgagtttgccaccgtcaactattttaccaagagaggttacgcc
tgggatggaaaaagcgtggtgccagagaagcaaaagaagaagaaggagtccatgctgaaa
aagaacaacacaacagcgtacccggccgccactgctacagccttcgctcccaacattgcc
agggaccctggtttggccaccattgccaaaagcgcccctccgcctccaactgagcccaag
gaggagcccaagcccaagcccccagaggccaagaaaacctttaacagcgtgagcaagatc
gacaggatcgccagaatagccttccctctgctctttggaacctttaacttggtctactgg
gccacctacttgaataagaagcccaaactgcaggggatgacttcacactaa
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