Syngnathus scovelli (Gulf pipefish): 125983026
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Entry
125983026 CDS
T08785
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125983026 (caskin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983026 (caskin1)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
125983026 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Caskin1-CID
Ank_5
SAM_2
Ank_3
Caskin-tail
Caskin-Pro-rich
Ank_KRIT1
SH3_2
SH3_1
SAM_TNK
SH3_9
PMC2NT
DUF8167_3rd
Motif
Other DBs
NCBI-GeneID:
125983026
NCBI-ProteinID:
XP_049599808
LinkDB
All DBs
Position
16:complement(1614083..1646869)
Genome browser
AA seq
1582 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPGKAKLLGSAKKVNVNFQDTDGFSPLHHAALNGNM
ELITLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNVQSDEGQIPLHLS
AQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPKKG
DTTDPNGTSPLHLAAKNGHIDIIRLLIQSGIDINRQTKAGTALHEAALCGKTEAVRLLLE
SGINATVRNTYSQTALDIVYQFTATQASKEIKQLLREASAALQVRALKDYCNNYDLTSLN
IKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGLASTVICTQQFQ
KIPLVAPATVAPANVVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYNRSPVTT
PQGDTPTAPGCRGSEASPHSSPTTSCGPHGGSNEEIWVLRKPVAGGDRSSLGSSGSVTSV
RSSGSGQSAGSAAHILHAQAEGVKLLATVLSQSAKAKEHLLEQSKSVDQPAVGSASSSRT
SSLSGCPLHEAPPYDATAGRKGEALGEGKSSEAVVQWLSDFQLQLYAPNFLGAGYDLPTI
SRMTPEDLTAIGITKPGHRKKMTTEINKMSVTEWLPDQKPASLGEWLCAIGLSQYHQVLV
QNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVKRLAEMQRNSDGRGSLRKKPPPIT
QQQEVMSLESPPPEDVMSPKMSTFQDSELSSELQNAMSHSAQEVKAHPARSLNKDPDELN
SGGGPPKKEARTMRQQSSQGSNSSHRSSVSSQGKHRHSHSHSQPAPPYTPPHTPTKTRTS
SSSSTSSVQSTSSPQSKHRVSPQFIQGETPLSPRSHPPQSPNHRGAPVQSPQQNQIYHQN
HPHEIGDCTQAQVPFLCLPPEAELADGDEVDLQKKRANSLNRRHATSDGECDERTAAGRG
RGGEGHVGASQGSNVRAEGVKYATVSHGVNRSHSVRNQDKTVTRNQPQSITLRQKKKGPP
PPPPKRSSSAISTSNSNLTEGNAPLQVLTTTDGMLDVPYHQQRRASDLGVSVETGAVETN
SMGSVRSIAAMLEMSSIGGGAKGMALQKNFLQAGKTRETIGLDGEVVNRRRTISGPVSEL
VAAARRDQPTLSVVSQPESSPPPVTSPSPNPSPGGSGSSSENLPFAEEGSLTIRRQGRGE
GQCVFCVCLQGDGEGDGGYTQEDIARVEATATLKRRPRSSKSHPNGSGFTLQESSTVKRR
PKSRDKEPEGYAGPNGDPPGSGAPDTPQPVLYQNGTATMKRRPLSDAGVTEQPQAQPQPQ
SQETAAPRRDSLDKGLPEEAPVKKPKPPVSPKPAMAQIKRQAVTQNSPQTASNKRVPLPG
PGTPVSPVEGKKIPPPVSPKPAPPPTAPKPAKLIHSMTSPPSPSSATPLAKLHPAVARQT
SSPPSLPNSNTPSPPNVKLPSPSAQSPHTPQTPTTPQTPQTPATPSPPVKPPRSSIGGVS
VDSGMTAMNTPVSSTTDFGVDSSVHQKLEETSASLAAALQAVEDKILRQEDSVTEQKTTV
SILDDIGSMFDDLADQLDAMLE
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggagttgctgcaggcggtgaagaccgaagacctgctcaccgtgcag
aagctgctgcaaaggccagggaaagcaaagctgcttgggtctgcaaagaaagtgaatgtc
aacttccaggatacagatggattttcccctctgcatcatgcagcccttaacggcaacatg
gagcttatcactctgttgctggagtcacaggcagctgttgacatcagagaccagaaaggt
atgcggccgttgcactacgcggcctggcaggggaaggcggagcctatgaagatgctccta
aaatctggttcgtctgtcaatgtccaatccgatgaagggcagattcctctgcacctgtct
gcgcagcacggccattacgacgtgtctgaaatgctgctgcagcaccagtccaacccgtgc
attgtggacaatgcgggcaaaacacctctagaccttgcctgtgagttcggcagagttggg
gttgtccaattattactctcaagtaacatgtgtgctgctctgctggaacccaagaaagga
gatactacggatcccaatgggacatctcctctacacttggctgccaagaatggacacatt
gacatcattagactgttgatccagtcgggaattgacatcaaccgacagaccaaagcgggc
actgccctgcacgaggcggccctctgcggcaagaccgaggccgtgagactcctgctggaa
agtggtatcaatgctacggtgcgaaacacgtacagccagaccgcgctggacattgtgtat
cagttcactgcaacccaagcgagcaaagagattaagcaactactccgggaggcgtcagca
gctcttcaagttcgggccttgaaagattactgcaacaattatgacttaaccagcctcaac
atcaaagcaggagatgtcattacggtgttggaacagcatcctgatggacgctggaaaggc
tgtatccatgacaaccgaacaggaaatgatagggtgggctacttcccctccaccatggtg
gaggtcatcagcaaacgaacaggtttggccagcacagtcatttgcactcaacagtttcaa
aagataccgctggttgccccggcgacggttgcccccgccaacgtggtagtcaacggcaac
gacaccacgttccatcagatccatatcctgcctccaccgcctcctcctccaccacattcc
catcagccactgcttccacttttcacttcctttggctataacaggtcgcccgtgacgacc
ccacagggagacacccccactgccccaggttgtcgtggctcagaggcaagtcctcacagc
tcccccaccacgtcctgtgggccccacggaggctccaatgaagagatctgggtactgcgc
aagcctgtggcaggtggagaccgaagcagtttagggagttctggaagtgtgaccagtgtg
aggtcgtcaggcagtggtcagagtgctggaagcgctgcacatatcctccatgcacaggct
gaaggagtcaagcttctagctacggtgttgtctcaatctgccaaagccaaggaacattta
ctggagcagtccaagtctgtagaccagcctgcagtaggttctgccagttcttctcggaca
tcgagcctatcgggctgtcctcttcacgaagcgccgccttatgatgccacggcgggcagg
aagggggaggcgctaggggaagggaagagctcagaggcagttgtccaatggctgagcgac
tttcagctgcagctctacgctcccaacttcctgggtgctgggtatgacttgcccacaatt
agccgaatgacccccgaggatctgacagctattggaataactaaaccaggtcacagaaag
aagatgacaacagagattaataaaatgagtgtcaccgagtggctgcctgatcagaaacct
gccagtcttggagagtggttgtgcgccatcggtctaagtcagtaccaccaagtattagtt
cagaatggttacgagaacatcgacttcatcacagacatcacttgggaggacctgcaagaa
attggcattaccaaactgggccatcagaaaaagctaatgttggcggtgaagcgactagct
gaaatgcagcgcaactcagatgggcgtggctccctcagaaagaagcccccaccaatcaca
cagcagcaagaagtgatgtcattggaaagcccacctccagaagatgtgatgtctccaaaa
atgagcaccttccaggacagcgagttgagtagcgagttgcagaatgccatgagtcattca
gctcaggaggtcaaagcacatccagcacgtagtctcaacaaggatcctgatgagttgaac
tctggaggaggaccgccgaagaaggaggcgaggacaatgaggcagcagagcagccaagga
agtaactcctcccacaggagcagcgtgtcttcgcaaggcaaacaccgtcactcccactcc
cattcccagcctgcacctccctacacgccccctcacactccaaccaagaccaggacgtca
tcatcttcttccacctcctccgtccagagcacatcctccccccagtccaaacacagggtc
tccccccagtttatccaaggtgaaacgcctctctcgccacgctcgcaccctcctcagtct
ccaaaccatcgcggcgctccggtccagtcccctcagcagaatcaaatctaccatcagaac
cacccccatgagatcggggattgtacacaagcgcaggtcccgttcctctgcctcccacct
gaggctgagctggcagacggcgacgaagtggatctccagaagaagcgagccaacagtctc
aaccggcggcacgctacatcagatggcgagtgtgatgagaggacggcggctggaagagga
cggggtggggaaggccacgtcggcgcaagccaaggctcaaacgttcgagcagaaggtgtt
aaatatgccacggtcagccacggcgtcaaccgcagccactctgtccgcaaccaagacaaa
actgttactcgcaaccagccgcagtccatcactctgcgccagaagaagaaaggtcctccc
ccgccgcctcctaaacgctccagctcggccatatccacctccaactccaatctgacagaa
gggaatgcgccgttgcaagtgctgactaccactgatgggatgctggatgtgccttatcac
caacaacggcgagccagcgatttgggagtatctgttgaaacaggagctgtggagaccaac
agcatgggaagtgtgaggagcatcgccgccatgctagaaatgtcttctatagggggtgga
gccaaagggatggccctgcaaaagaacttcctgcaggccgggaaaacacgcgaaacaatc
ggtctggacggcgaagtggtgaaccgacgacggaccattagcgggcccgtctctgagttg
gtggcagcggcgaggcgtgaccagccgacactgtctgtcgtctcccagcctgaatcctcc
ccgcctcctgtaacctcaccttctcccaatccaagccccggaggaagtgggagttcttcc
gaaaacctgccatttgccgaggagggaagcctgaccatccgccgacaaggtcgaggagaa
ggacagtgtgtattttgtgtctgcctgcagggtgatggcgagggcgatggcgggtacact
caggaggacatcgcccgggtggaagccacggcaaccctcaagcgccggccccgcagctcc
aagagccaccccaacggctcaggcttcaccctccaggagtcgtccaccgtcaaacggaga
cccaagagtcgcgacaaggaaccggagggatacgccgggcccaacggagatcctccgggt
agcggagcacccgacaccccgcaaccggtactttaccagaacggtacggccaccatgaaa
cgccgcccgctgtctgacgccggagtgacggagcagccccaagcgcagccccaaccacaa
tcccaagagactgctgctcctcgaagggacagtttggacaaaggccttccagaagaagct
ccagtgaagaaaccaaaaccgcccgtctcccccaagccagccatggctcagatcaagaga
caagcagtcacgcagaacagcccacagacagcctccaacaagagagtccctctaccggga
ccggggacacctgtcagtccagtggaaggaaagaagatcccccctccggtctcgcccaaa
cccgcccccccaccgacggcgcctaagccagccaaattgatccactccatgaccagcccc
ccttccccgtcctcagccacccctctggcaaaactacaccccgcggtggcccggcagacc
agctcgccaccctctcttcccaattccaacacccccagcccaccaaacgtgaagctccct
agcccgtcggcacaaagtccgcataccccgcagacgcccaccacgccgcagactcctcag
acccccgccactcccagcccgccagtcaagcctcctcgctcctccattggcggcgtatct
gtggacagcgggatgacggccatgaatacgcccgtgtcctccacgacagactttggtgtg
gattcttcggtgcatcaaaagctggaggagacgagcgcgtcgctcgctgccgccctgcag
gccgtggaggacaagatattgcggcaggaggattccgtgacagagcaaaaaaccaccgtg
agcattctggacgacatcggcagcatgttcgacgacctggccgaccagctggacgccatg
ttggagtaa
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