Syngnathus scovelli (Gulf pipefish): 125983056
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Entry
125983056 CDS
T08785
Symbol
atf4b
Name
(RefSeq) activating transcription factor 4b
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04137
Mitophagy - animal
sscv04141
Protein processing in endoplasmic reticulum
sscv04210
Apoptosis
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125983056 (atf4b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125983056 (atf4b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125983056 (atf4b)
09143 Cell growth and death
04210 Apoptosis
125983056 (atf4b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125983056 (atf4b)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125983056 (atf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125983056 (atf4b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
125983056 (atf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
125983056
NCBI-ProteinID:
XP_049599883
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Position
16:complement(1579602..1582292)
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AA seq
437 aa
AA seq
DB search
MTMMMTNSLFGLEDMEALLWKTSSPTADAVGLAAFHPDREDHRKGGRTSVDGVASPVSPF
NSSFLSSSSSPLPFYSPPRSPPAVLQEKTEFSSDPLQFPWSDQSEQLRDTEVVSADSKDD
VFGDLDWMAERVDLSDLDLDSLIGTCSPNEENPSDPDDLLATFDCPIELDSLPIPTLSSL
ADPSPDVRHPPSVESDPVISLAEPVSHNDPCDVPSPVPSIPEPEEEFEIKSEPTPADSPS
SSSSCVDSPSSPAYTLDLGSEVDVPMDEVKPMVATVLPQVQRVVLSLSPTRIVLVLASKD
DATAPSTISTRSNISPSSSAASPLTRSSRTRPYPDPKPKDRPPLPTVQVKSFTGADERGT
LKAPKNKKLKKMEQNKTAATRYRQKKRAEHDALSTEHSMLERKNVELKEKAESMAREIEY
LKELMEEVRMARLKSGL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgatgacaaactcactgtttggcctggaagacatggaggctcttctgtgg
aagacttcctctcccacggctgacgccgtgggcttagctgcgtttcaccctgaccgagag
gaccatcgcaaaggaggacgaacctcagtggatggagtcgcatcaccagtgtcaccattc
aactcgtcatttctgtcttcttcttcctctccccttcccttctattctccccctcgttcg
ccgccggctgtcctccaggagaaaactgagttttcatctgatccacttcagttcccctgg
tcagaccaatcagagcagttgagagatacagaggtggtctcagctgacagcaaagatgat
gtgtttggtgacctggactggatggctgaaagagtggatctgagtgacttggacctggac
tccctgataggcacctgcagtcctaatgaagagaatcccagtgatccagatgacctcctg
gccacttttgattgccccattgagctcgactcactcccgatacccactctgtcaagtctt
gccgatccttcaccagatgttcgtcacccgccctctgttgaatctgacccagttatctcc
ttagcagaaccagtctcccacaacgatccgtgcgatgttccctcccctgtcccatctatc
ccagaacccgaagaggagttcgaaatcaaatctgaacccacacctgccgactccccaagt
tcttcctcatcatgtgtcgattctccctcatccccggcttacaccctcgacttggggagt
gaagtggatgttcccatggatgaggtgaagccaatggtagccacagtgttgcctcaagtc
caaagggttgtactttccctttcaccgacccgaattgtccttgtgttggcttcgaaagat
gacgcgacagcgccctccaccatatccactcggtccaacattagtccttcctcttccgca
gcatcgcccctaacaaggtcctccagaaccagaccataccctgatcccaaaccaaaagat
agaccacctttgcccacagttcaagtcaagtcatttacaggtgcagatgaaagaggaaca
ttgaaggctccaaagaacaagaaattaaagaagatggagcagaataagacggcagctact
cgctatcggcagaaaaagagggcggagcatgatgccctgtcgaccgagcactccatgcta
gagaggaagaacgtcgagctgaaagagaaggccgaatctatggctcgagagattgagtac
ctcaaagagctcatggaggaagtccgtatggcgaggttgaaaagcggactctga
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