Syngnathus scovelli (Gulf pipefish): 125983082
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Entry
125983082 CDS
T08785
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1 isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125983082
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125983082
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125983082
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125983082
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125983082
Protein kinases [BR:
sscv01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125983082
CD molecules [BR:
sscv04090
]
Proteins
125983082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
C2-set_2
Ig_VEGFR-1-like_5th
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
125983082
NCBI-ProteinID:
XP_049599931
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Position
1:10837125..10852688
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AA seq
1001 aa
AA seq
DB search
MQSLLSLLLGFVIFVAAAEWRRPVIRLNSKVVSGPEVVVKSGTILDLRCEGDAPVNLQPR
LAKHKRYMSKGRGNVSILKVERLSAEFTGTYRCSYTGGTQHRNVTSSVHVFVKDPSRVFW
TSSTLLRVVKKEGEVYLLPCLLTDPSATDMSLRMDNGTSVPPGMNFTVYRHRGILIHSLH
PSFNADYVCTAKVNGVERTSKAFSINVIQKLRFPPYVFLEKDEYIRIVGEELKICCTTHN
PNFNYNVTWIYTTKSKPTIEEKVRSSGENRLDIQSILTIHAVDLADTSNISCIGTNEAGV
NSSTTYLLVVEKPYIRLLPQLSPKLAHKGLAIEVNEGEDLELTVLIEAYPHIVEHSWQTP
TSSSTSTQENKLIRYNNRYHATLQLKRMNAQEQGQYTFNARSDLANASITFQVQMYQRPV
AMVRWENVTTLTCTSFGYPAPRIIWYQCFGIRPTCNENNTGLQMATLLQAQTVELQRGEY
GAVAVESVLTVGPSSRRMTVECVAFNLVGVSSDTFAMEVSGAYPIRNKLFTSTLTGSAGI
LSILLLLLVFLLYKYKQKPRYEIHWKIIEARDGNNYTFIDPTQLPYNDKWEFPRDKLKLG
KILGAGAFGKVVEATAIGLGEQDNVMRVAVKMLKASAHSDEREALMSELKILSHLGHHKN
IVNLLGACTYGGPVLVITEYCSLGDLLNFLRQKAETFMSFVINLTENANDYKNICNQKKF
IRSDSGISSESSSSYLEMRPCQLPNSEPLQNAACKENGEWPLDLDDMLRFSYQVVQGLDF
LAAKNCIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF
DCVYTVQSDVWSYGILLWEIFSLGKSPYPSMAVDSRFYKMVKRGYQMSQPDFAPPEIYDI
MKMCWNLEPTKRPTFSKISQMIQRQLGEQAEQEQLIYQNVNQQEQQQRQQQQQPEPRQQV
TEAELSEECDPPKCCDGHCEQSCDLEEEEQPLMKTNNYQFC
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctctcctcagtctgctgctgggatttgtgatcttcgttgccgcagcggagtgg
aggcgtccagtgatcaggctcaactcaaaagtggtgtcaggtcctgaggtggtggtcaaa
tcaggcaccatactggatctaagatgcgaaggtgatgcacctgtgaacttgcaaccaagg
ctggccaaacacaaacgttacatgtccaaggggagaggaaatgtctccattttaaaggtg
gagcgtctctcagctgaattcactgggacctacaggtgttcttacacaggcgggacccag
catcgtaatgtgacctcatcagtgcatgtgtttgtaaaagatcccagccgtgtcttctgg
accagcagcaccttgctgagggttgttaaaaaagagggtgaggtttacttgctaccctgc
cttctgactgatccaagtgccacagacatgagtctccgcatggacaacggcaccagcgtt
ccccctgggatgaacttcacagtataccgccaccgtggtattctcatccacagcctccac
cccagcttcaacgctgactacgtatgcacagccaaggtcaacggggtagagcgcacctcc
aaagccttctccattaacgtcattcagaagctccgcttccctccgtatgtgtttttggag
aaagatgaatacatacgaattgttggggaggaactcaagatctgttgtactacacacaat
cctaacttcaactacaatgtcacctggatatacaccaccaaatcaaaacccaccatagaa
gagaaggttcgctccagtggagaaaaccgtctggacatacaaagcattctaaccatccat
gccgtggaccttgcagacacgagcaacatttcctgcatcggcactaatgaagcaggggtg
aacagttcgacgacatacttgctggttgtagaaaagccatacatccgactgttgccccag
ctctccccaaagctggcccacaagggtcttgcaattgaggtgaatgagggagaagatttg
gagctcacggtgctcattgaggcgtaccctcatattgtggaacacagctggcaaacgcca
acatcttccagtacgtccacacaggagaacaagctcattcggtataacaacagataccac
gctacattgcaactaaagagaatgaatgcacaggagcaaggccagtacaccttcaatgct
aggagcgacttggccaacgcctccatcacattccaagtccagatgtatcagagaccggtc
gccatggtgagatgggaaaatgtgaccactctgacgtgcacgtcctttggttatcctgcc
cctagaatcatctggtaccaatgttttggaatacgcccaacgtgcaacgaaaacaatacc
gggctgcagatggccaccctcctacaagctcaaacagtggagcttcagagaggggagtac
ggggcggtggcggtggagagtgttctgaccgtgggaccatccagccgaaggatgacagtc
gagtgtgtggcctttaacctcgttggagtcagcagcgacacatttgccatggaagtttct
ggtgcatatccaatcagaaacaaacttttcacctccaccttgaccggatcagcaggcatt
ctgtccatcctccttctgcttctggtttttctgttatacaaatataagcagaaacccagg
tatgagatccattggaagatcattgaggcaagagatggaaacaactacacatttattgac
cccacacaactgccctacaatgataaatgggagttcccacgggacaaactgaagttagga
aaaatcttgggtgccggagcttttggaaaagttgtggaggccacagccatcggtctggga
gagcaagacaatgtgatgcgtgtggctgtgaaaatgttaaaagccagcgctcattctgac
gagagagaagctctgatgtcagagctgaagatcctgagtcacttgggacatcacaagaac
attgtcaatctactgggggcctgcacctatggaggacccgtgcttgtaatcacagagtac
tgcagcctcggggacctattgaacttcctccgccagaaggctgaaacttttatgagcttt
gttatcaacttaacggagaacgctaacgactataaaaacatctgcaatcagaaaaaattc
ataagaagtgacagtgggatctctagtgagtcgtcgagcagctacttggagatgagaccg
tgtcagctgccaaacagcgaaccattacaaaatgcagcgtgcaaggaaaatggagaatgg
ccgttggacttggatgacatgttgaggttttcctatcaagtggttcaaggcttggacttt
ttggctgctaaaaattgcattcacagagacgtggctgctcgaaacgttctcctgacagac
cgtagagtagccaagatttgtgactttggcctggcccgagacatcatgaacgactccaac
tacgtggtgaagggcaacgcacgtttgccagtgaagtggatggctccagagagcattttt
gactgcgtatacactgtccaaagtgacgtctggtcctatggaatcctcctgtgggagatc
ttttctctgggcaagagcccttaccccagcatggctgtggactccaggttctacaagatg
gtgaagcgaggctaccagatgagtcagccagactttgcccctcccgagatctatgatatt
atgaagatgtgctggaatctggagcccaccaagcgccccactttcagcaagatcagtcag
atgatacaaagacagcttggtgaacaagcagaacaagaacagctaatttaccagaatgtg
aatcagcaagagcagcaacagcggcagcagcaacagcagcctgagccgcggcagcaggtc
acagaggctgaattgagcgaggaatgtgacccgccaaagtgctgcgatggccactgtgag
cagtcttgtgacctcgaggaggaggagcagcctttgatgaagaccaacaactatcagttt
tgttga
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