Syngnathus scovelli (Gulf pipefish): 125983097
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Entry
125983097 CDS
T08785
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125983097 (ppfia3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983097 (ppfia3)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125983097 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Tc-38
Motif
Other DBs
NCBI-GeneID:
125983097
NCBI-ProteinID:
XP_049599937
LinkDB
All DBs
Position
16:complement(8146355..8159460)
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AA seq
1230 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGGSSSPAGSGSGLGGGIGGGMGGYGSRDPRGGGDEGGSTGNL
ESLMVNMLTERERLLESLRETQDSLGTAHLRLRELGHEKESLQRQLSIALPQEFAVLTKE
LNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSS
EVEVLKALKSLFEHHKALDEKVRERLRVALERVATLEDELQSSSQEVVSLREQIKRRQQG
LDKERLPNGPSSILDDSEVDRQRESEIERQRSELGQLKERLALMCRQVGEIEEQLTSARR
ELTRSEEANHKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELAS
KESLHRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGNF
EERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHLKERMAA
LEEKNALSEELSNMKKIQDDLLANKDQLIAELERLQLELDQLRARPGGSYSSRSLPGSAL
ELRYSHGGGSLPMGSTTHLDTFGNTSLVGRRSLRARWSSAREDSTKYTDWETGALLGSGY
DHGVDVVCSDDEDDGDHRFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKENT
ELRAEEIESRVSSVALDSPPIPPSSLGRDGAGRGFIPSSITSSTLASPSPPSSGHSTPRL
PHSPARENDRQNNKDDERTLALLDSTPPPTPRALRLDRMTLTHPGALLDDPREFRSLSAD
GSSSNSSQDSLHKASKKKSIKSSIGRLFGKKEKGRMGQPGRDGSASLASTPSEDLAAGDP
MGMNKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLELWVGMPAWYVAA
CRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASTRSSTSNV
WMTHAEMESLNAAIKPPELKEFSWDQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLV
DARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRREDSAHHNKDVM
VWSNERVMCWVQTLGLKEYADNLRESGVHGALLALDDTFDYTDLALLLQIPNQNTQARQL
LEQEYNSLISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSAETLPANFRASAI
ATPSVTLRKVQSDASSSARGESASVRTYSC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctcggaggacgggcgcggcgggggcggcggtggc
tcgtcctcgccggcgggatccggcagcggcctcggtggaggtattggaggtggcatgggc
ggctatggcagccgggacccccgtggcggtggggatgaagggggcagtacgggcaacctg
gagtcgttgatggtcaacatgctgacggagcgagagaggctgttggagagtctgagggag
acccaggacagcctgggaacggcccacctgcgactacgagagctcgggcatgagaaggag
tcgctacaaaggcagctgtccatcgcgttgccgcaggaatttgcggtgctgaccaaagag
ctgaacctgtgtcgcgagcagcttctggaacgggaagaggagatcgcagagctcaaagcc
gagcgcaacaacacacgattgcttctggagcacctggagtgtttggtgtcacgtcacgag
cgcagcttgaggatgacggtcgtgaagcgtcaggcgcagtcgcctgcgggggtctccagc
gaggtggaggtgctcaaggccctcaagtccctgttcgagcaccacaaggccctggacgag
aaggtccgcgagaggctgcgcgtggccctggagcgggtggccacgctggaggacgagctg
cagtcgtcctcgcaggaagtggtctctctacgcgagcaaatcaaacgacgacagcaggga
ctcgataaagagcggcttcccaacgggccgtcgtccatcttggatgacagcgaggtggac
cggcagcgcgaaagtgagatcgaaagacagcgatctgagttggggcagctcaaggagagg
ctggcgctcatgtgcagacaggttggcgagatcgaggagcagctgacgtctgccaggaga
gaactgacgcgatcggaggaagccaaccacaaactgcaacgagacgttaaggaggccctg
tgtcagcgagaagacatggaggagcgaatcaccacactggagcgcaggtacctgagtgcc
cagcgggaggcgacatctctccacgatatcaaagacaagctggagaacgagctggccagc
aaagagtctctccaccgtcagagcgaggagaagaaccgtcagcttcaggagcggctggac
gacgccaagcagaagctgcagcaaaccttgcagagggccgagacactgcccgagatcgaa
gcgcagctggcgcagagggtggccgccctcaacaaggccgaggagcgccacggcaacttt
gaggagcgactacggcagatggaggcgcaactggaggagaagaaccaagagctgcagagg
gccaggcagcgtgagaggatgaacgacgagcacaacaaacgtctctcggacacagttgat
aagctgctgtccgagtccaacgagaggctacagctgcacctcaaagagaggatggccgcg
ctggaggagaagaacgctctttctgaggagctgtccaacatgaagaagattcaggatgat
cttctggcaaacaaggaccagctcattgcagagctggaacgccttcagcttgaactcgat
caactgagagccaggcccggaggctcttattccagtcgttctttgcctggcagcgctctg
gagctgaggtactcccacgggggtggctccctccccatgggctccaccactcacctggat
accttcggaaacacatccttggtcggcaggcgaagcctccgagcccgatggagctccgcc
agggaggactccaccaagtacacagactgggagacgggggcgctgctggggtccggctac
gaccacggtgtggacgtggtgtgctcagacgatgaggacgacggagaccatcgcttcggg
tccgagctgctgtcacccagcggacagacagatgtacagacgctggccatcatgttgcag
gaacagctagaggctatcaataaggagatcaaactgatccaggaggagaaggagaacacg
gagctgcgggccgaggagatcgagagccgcgtcagcagcgtggccttggacagtccacct
atcccgccctcctcactgggcagggacggtgccgggcgaggcttcatcccgtcctccatc
acctcttccaccctggcctcgccatcgccacccagttcggggcactctaccccacgcctt
ccccactcgccggcccgcgagaacgacagacagaacaacaaagacgacgagcgcactctg
gccctcctcgactccacgccgccacccacgccgcgggccctacgcctggacaggatgacc
ctcacccacccgggggccctgctggatgaccctcgtgagttccgcagcctgtcagcagat
ggcagtagctccaacagtagccaggactccctgcacaaggccagcaagaagaagagcatc
aagtcttccattggacgactttttggcaagaaggaaaagggcaggatgggacagcctgga
agagacggctcagcctcactcgcctcgacgccttctgaagacctggctgccggagacccc
atgggcatgaacaagaccgggactttgggaccggcggacaaagaccggcgcagcaagaaa
aagcacgagcttttagaagaagcgtgtcgccaaggtttgcctttcgcatcctgggacggt
cccaccgtggtgtcatggctggagctgtgggtgggcatgcctgcctggtacgtggcagcc
tgccgggccaacgtgaagagcggcgccatcatggccaacctgtcggacacggagatccag
cgtgagatcggcatcagcaacccgctgcaccgcctcaagctgaggctcgccatccaggag
atggtgtctctcaccagcccctcggcccccgccagcacacgctcgtcgaccagtaacgtc
tggatgacccatgccgagatggagtccttgaacgcagcaatcaagccgccggagctgaag
gagttcagctgggatcagatccttgcttatggcgatatgaatcacgagtgggtgggcaat
gactggctgcccagtctgggcctgccgcagtaccgcagctactttatggagtcgctggtg
gacgcccgtatgctggaccacctcaccaagaaggagctgagagggcagctcaagatggtg
gacagcttccacagggtgagtttgcattacggcatcatgtgcctcaagcgcctcaactac
gaccgcaaggagctggagaggcggcgggaagacagtgcgcaccacaacaaagatgtgatg
gtttggtcaaacgagcgcgtgatgtgctgggtgcagacgttgggcctgaaggaatacgcc
gacaaccttcgcgagagcggcgtccacggcgccctgctggccctcgacgacaccttcgac
tacaccgatctggcgctgctgctgcagatacccaatcagaacacacaggcccgccaactc
ttggagcaagagtacaactcgctcatctccatgggaaccgagagacggcctgatgaagac
ggcaccaagacgttcacgcgctctccatcgtggcgcaaaatgttccgcgagaaggacctg
cggggcgtcacctcggactcggccgagaccctgcctgctaatttccgtgcctccgccatt
gccacgccctccgtcaccctcaggaaggtccagagcgacgccagctccagtgcccggggt
gaatctgcctccgtgaggacgtactcgtgttga
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integrated database retrieval system
