Syngnathus scovelli (Gulf pipefish): 125983124
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Entry
125983124 CDS
T08785
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125983124 (ap5z1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
125983124 (ap5z1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
125983124
NCBI-ProteinID:
XP_049600026
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Position
16:1186967..1192032
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AA seq
835 aa
AA seq
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MYSNGTESLIKQAREIQESELQKFYSRLIKLLQGKEHSHETIDSLQRLRLIVFATKYTRT
LPPELHKSLVSLLSSPVEQLQVLSSAVLRETLPLVARTENYNQDGNSQLNTHAAAVLLAQ
AQSGDDLSALCTQLLRGLDNRPSEGPTTHLLPHTLPIVNSILTHSPESLTEDNVTLLSKK
LVDWLRYASTTQGGGASSGGFFTGSRSRQPLPIAELDGTVSGDFFTVLCVGQGFTEDQWM
NVYSFSMLRHWLLTFHSVPGGAIADTANRLQLSLSLSHSISNDDRSEMDGSVVSMVSVTS
SSSRLLPPKERLREKAFQYCQRLIEQSDRKAQKKTDADLQKACLVEAVCILDSVCVEDPS
FVYRVFPCIKALFGRLSSDLSFARVLLPVAQFYLNHGELAAVDCDCVWNLVLGRFPAELF
NDPFLAHELLRFLRLNLENVQLQVPQYIRHFPNLLKFLAWDSPTVIDDFVDLLPSMVTSS
TALELLHTLLDLPCLSATLLLQHRSMCLPISDPGGRHLASMNAFRNPSFRGLFLFLLRGE
AGTGDTIDRLSTLLELLSEAADWPRVVQCAQTVPILLHIFFNTVINVADRTLLGQVLLVM
LERSSLLLNNPKYITEIHRVFSRQLINLCKLHPSLVIDQSHELLEFAGTTSNVYNKQEVY
THVVLVLGEYLSVSYDSRCSTKLITSCFETLEAVLFEITSSAPHSGTGCPAPRAITTLMS
ALAKLASRSHDLIPRVSLLLSKLRNVSSGGSVSWCEDDEDLDSILTLGEELCALLKMPGV
AQSVLNPPAHVTAPRWHQDTNVAMPLQLRALTRLTQAHASHAQHTPTSPSPHTST
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtattctaatggtaccgaaagcttgattaaacaagcaagggagattcaggagtccgag
ttgcagaagttttacagtcgattaatcaagttgctccaggggaaagagcatagtcacgag
actattgattccttgcaaagactgcgtctcatcgtttttgccactaaatacaccagaacg
ttgcctcctgaacttcacaagagcctagtatcgcttctctcttcccctgtggagcaactt
caagtgctgagctcagctgttctcagagagacacttcccctcgttgctcggacggagaac
tacaaccaggacggaaacagtcaactgaacactcacgcagctgccgtgctgcttgctcag
gctcaatctggagatgatctgtcagctctctgcactcagctcctccgcggtttggacaac
cgaccctcagaaggaccgacgacgcacttgctcccgcacaccctgccgatcgtcaactcc
atcctcacacacagcccggagagcctcaccgaagataacgtaaccctccttagtaaaaag
cttgtcgattggctgcgttatgcgagtaccacgcaagggggcggggcttcctcaggagga
ttcttcacggggtccaggtcacgtcagccgctgcctattgccgagctggacgggacggtg
tcgggcgatttcttcacggtgctgtgtgttggtcaaggcttcaccgaagaccaatggatg
aacgtttactccttttccatgctccgacattggctcctcacattccactctgtgcccggt
ggcgccatagcggacactgcaaacagattacagctaagtctctccctctctcactcaatt
tctaatgacgatcggtcggagatggacggctctgtggtttccatggtttccgtcacgtcg
tcgtccagccgcctgctgcctccgaaggagcgcctaagagagaaggccttccagtactgc
cagcgcctcatcgaacagagtgatcgcaaggctcagaagaagacagacgcggatctgcag
aaagcctgtctggtggaagccgtgtgtatcctggactcggtgtgcgtagaggatccgtct
tttgtctaccgagtgttcccgtgcatcaaggcgctttttggtcgtctcagctccgacttg
tcattcgctcgagtcctgctgcctgtggcgcagttctatctcaatcatggtgaactggcc
gctgtggactgtgattgtgtatggaacctagttttgggtcggttccctgccgagcttttc
aacgaccctttcctggcacatgagcttctgcgctttctgcgactaaacctggagaacgtg
caactccaagttccccagtacatacggcacttcccaaatcttctcaagtttttagcgtgg
gacagccccacagtgattgatgactttgttgatctgctgccctctatggtgacatcgagt
actgcattggagctgctgcatactttgctggatctcccctgtctttcggctactctgctc
ttgcaacacagatcaatgtgtctgcccatttccgatccgggagggcgccacctggcatca
atgaacgcattccgaaatccatcgttccgagggcttttcctctttctgcttcgaggtgaa
gcgggcacaggtgacacaatagaccgactgagcacgctccttgagctgttatccgaggct
gccgattggccgagagtcgtacagtgcgcccagaccgtcccgattctgctgcacattttt
ttcaacactgtcatcaatgttgccgacaggacccttttaggtcaagtccttttggtgatg
ctggagagaagcagcctcctcctcaacaaccctaaatacatcacggagatacacagagtg
ttcagccgtcagctgattaatctgtgcaaactccacccgtctttggtcattgaccaatcc
cacgagctgctggagtttgccgggaccacgtccaacgtgtacaacaaacaagaagtctac
acacatgtggttttggtgctcggggagtacctttctgtgtcatatgactctcgctgctcc
acgaagctcatcacgtcctgttttgagactttggaggcagtgctttttgaaatcacatca
tctgccccgcactcaggaactggctgccccgcccctcgcgccatcaccactctaatgagc
gccctcgctaaactggcgtcccgatcacacgatctgatacccagggtgtcgctgctcctc
tccaagttgagaaacgtatccagcggagggtccgtttcctggtgcgaggacgacgaggac
ctggattccatattgactctcggggaggagctgtgcgctctcctgaagatgcccggcgtg
gctcagagcgtcctaaacccaccggcgcacgtgaccgcgccccggtggcaccaagacacc
aacgtggccatgccgctccaactgcgagcgctcaccagactcacgcaggcgcacgcgtca
catgctcaacacacaccgacttcgccgtcaccccacacaagcacgtaa
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