Syngnathus scovelli (Gulf pipefish): 125983125
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Entry
125983125 CDS
T08785
Symbol
sgsm3
Name
(RefSeq) small G protein signaling modulator 3 isoform X1
KO
K20176
small G protein signaling modulator 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983125 (sgsm3)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125983125 (sgsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
125983125
NCBI-ProteinID:
XP_049600028
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Position
16:complement(962709..968982)
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AA seq
776 aa
AA seq
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MSGTYTPAPGGPFSALTPSMWPQDILAKYHQKDNTELNGLKYDEFGFRVDTEETDDPSPW
LGTEGSPQHENPQQRLRWQAHLEFTHNHTVGDLTWDLIVPVLPRSERLRTLVLGGIPHSM
RPQLWMRLSGALQKKRTSEISYKEIIKNSSNDDTSTSKQIEKDLLRTMPTNVCFSNLTSV
GVPRLRRVLRGLAWLYPDIGYCQGTGMVVSCLLLFMEEEDALWMMCALIEDLLPPAYFSS
TLLGVQTDQRVLRQLIVQYLPALDRLLQEHDIELSLITLHWFLTSFASVVDIRLLLRIWD
LLFYQGSLVLFQITLGMLKIKVSSHTLNSFPKAFYNVRRLRPPQEEELISSENSASIFNT
LSDLPSQLRDGPAVLGEALRLAGNLSQDALDAHRHKHLAYILNEQAQMDSGSAPLNSNLN
KVVRRQSLRRKSTLSSLLFGEDEAEALKSKNIKQTELVAALREAITRTSEHFHCLDPRHS
STELTPDYSMESHQRDHENFLVVSRNRRRRAKALLDFERHDDDELGFRKNDIITIVSQKD
EHCWVGELNGLRGWFPAKFVEILDERSKEYSLAGDDSVTEAVTDLARGTLCPALKAIFLH
GLKKPSILGGPCHPWLFIEEAASREVERDFNSVYSRLVLCKTYRLDEDGKVLTPEELLYR
AVQSVNMSHDVAHVQMDVKFRSLICVGLNEQVLHLWLEVLCSSMAAVEKWYHPWSFLRSP
GWVQIKCELRVLSKFAFSLSQDCELPEQKEKEQRPLKEGVQDMLVKHHLFSWDIDG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcacgtacaccccggcccccggtgggcccttctcagcgctcactccaagcatg
tggccccaggacattttggctaagtaccatcaaaaagacaacacggaattgaatggactc
aagtatgatgagtttggcttcagagtggacacagaagagactgacgatcccagtccttgg
ctcggcactgaaggctcaccgcaacacgaaaacccgcagcagaggttgcgctggcaagcc
catttggaattcacgcataatcacacagtgggcgacctcacctgggacctcatcgtgccc
gtcctcccgcgctccgaacgcctgcggacgctcgtactcggcggcattcctcatagcatg
aggccgcagttatggatgcgtctgtcgggagccctgcagaagaagaggacctctgaaatc
tcctataaagagatcattaagaacagctccaatgatgacacctccacatctaaacagata
gagaaggacttgctgcggaccatgcccaccaacgtgtgcttcagcaacctgacgagcgtc
ggggtcccgaggctgcgacgggtacttcgaggcttggcctggctttaccccgacatcggc
tactgtcagggaactggaatggtggtttcctgcctgttactcttcatggaggaggaagac
gcgctatggatgatgtgtgccctgattgaagacctcctccctccagcgtacttctcctcc
accctgctgggcgtccaaacggaccagcgagtgcttcgtcagctcatcgttcagtaccta
ccggcccttgaccgccttttacaggagcacgacatcgagctgtctctgatcacgttgcac
tggttcctaacatcctttgccagtgtggtggacatccgtttgctcctccggatctgggac
ctccttttctaccagggctccttagtgctatttcaaatcacgctgggcatgctgaagatc
aaggtgagctcacataccttgaattcttttccaaaggcgttttataatgtaaggcgtctc
cgtccacctcaggaggaggagctcatatcgtccgagaactctgcgtctatttttaacact
ctgtccgacctaccgagccagttgagggacgggccggccgttctcggggaagctttgagg
ctggcagggaatctgtcacaggacgccctggatgctcaccgacacaagcacctggcttac
atcctcaacgagcaggctcagatggatagcgggagcgcgccgctcaattccaatctcaac
aaggtggtgcggaggcagtcccttcgtcgaaagtccacgttaagctctctgctgtttggg
gaggatgaagccgaagctctcaagtccaagaacattaagcagacggagctggtggcggcc
cttcgagaggccatcactcgcacgtcagagcatttccactgtcttgacccgcgccactcc
agcactgagctaacccctgactactccatggaaagccaccagcgggaccatgaaaacttc
ctggtggtgtcccggaaccgacggcgacgagccaaggctttgctggatttcgagaggcac
gacgatgacgagttgggcttcaggaagaatgacatcatcacgattgtctcacagaaggat
gaacactgttgggttggggagctcaatggccttcgaggctggttccccgcaaagtttgtg
gagatcctcgacgaaagaagtaaagagtactcgttagcaggagacgactctgtaacagaa
gctgtgaccgatctagccagagggactctgtgcccggccctgaaggccatctttctgcac
ggcctgaagaaaccctccattttgggcgggccctgtcacccgtggttattcatagaagag
gcggccagcagagaggtcgagagagacttcaactcggtctactccagactggtgctgtgt
aaaacctacaggttagatgaagatgggaaggttctaacaccagaagagctcctataccgg
gcggtgcagtcggtcaacatgagccatgacgtcgctcacgttcagatggatgttaagttc
cggtctctgatctgcgtcggcctcaatgagcaggtgttgcatttatggttggaggtgctg
tgttccagcatggcggccgtcgagaaatggtatcatccgtggtcatttctacgcagtcca
ggatgggttcagattaaatgtgaactcagggtcttatcaaagtttgccttcagtctttct
caagattgtgaattaccggagcagaaagagaaggagcagaggccgctgaaagagggcgtg
caagatatgctggtgaagcatcatctcttcagctgggacattgacggctag
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