Syngnathus scovelli (Gulf pipefish): 125983129
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Entry
125983129 CDS
T08785
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125983129 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125983129 (gtpbp1)
03012 Translation factors [BR:
sscv03012
]
125983129 (gtpbp1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125983129 (gtpbp1)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125983129 (gtpbp1)
Translation factors [BR:
sscv03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
125983129 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
125983129
NCBI-ProteinID:
XP_049600044
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All DBs
Position
16:956998..962629
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AA seq
676 aa
AA seq
DB search
MASIATTAHESSSALADALLPASIFAPDRGGCVDDPGDEFYEDGDMLNGEPEDRRIDFTS
KLALVSPNGEQYDSLLSQLRDRMEEGSGETIYVLGMGSDGGDWGLSDKDMEASEATVRSM
CAQLDSDLIPLRERREAEGLVRDYLIRRRVGELDFLEVRVAVVGNVDAGKSTLLGVLTHG
ELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTKICEK
SSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPV
FVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIF
QISNVTGENMDLLKMFLNLLSSRTCYRDDQPAEFQIDDTYSVPGVGTVVSGTTLRGLIRL
NDTMLLGPDPLGSFISIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSTIRKGMVMVSPR
LNPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMNRDCLRTGDKASVHFR
FIKTPEYLHCDQRLVFREGRTKAVGTITKLLQSTNNLPSNSKPPQIKMQSTKKAPPRKDD
NTAPATGDEGLTIAPSAGPSTMQQGEGEEDPQLKEGNKENKPKSGGGGRRRGGQRHKGKG
QNMSTAAASTSGTGGC
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatagcaacgacggcgcatgagtcaagctctgcgcttgctgatgctttacta
ccagcgagtatattcgcacctgaccggggaggatgcgtggacgaccccggggatgagttc
tacgaagatggggatatgcttaacggcgagcccgaggatcgaaggatcgactttactagc
aagctggcccttgtcagcccaaacggagagcagtatgactccctacttagccagctaagg
gataggatggaggaaggctccggagagaccatctatgtgctcgggatgggttcagatggt
ggcgattggggtctcagtgacaaggacatggaggcttcagaggccacggtgcgatcaatg
tgtgcacaattggactccgacttgatcccgctcagagaacgcagagaggcggagggtttg
gtccgggactatctgatacgtcgccgtgtaggggagctagactttctggaggtcagagtg
gcagtggtcggcaacgtggatgctggaaagagtacccttctgggagtgttaacacacgga
gagctggataacggcagaggcttcgctcgccagaagctcttcagacacaagcacgagatg
gaaagcggtcggaccagcagcgtgggcaacgatattctcggatttgaccaagagggacag
gttgtaaacaaaccagatagccacggaggaagtctggattggaccaaaatctgcgagaag
tcctctaaagtgatcaccttcatcgatctggctggccatgagaaatacctcaagactacc
gtgtttggaatgacgggacacctcccagacttttgcatgctcatggttggcagtaatgcg
ggcattgtaggcatgaccaaagagcacctgggtctggccttagccctcaacgtccccgtg
tttgtcgtggtgacaaaaattgacatgtgtccagccaacatccttcaagaaacattaaag
ctgcttcagaggttactcaagtcccctggctgcagaaaaatccccgtcctggtgcagaac
aaggacgacgtcatagtcacggcatccaacttcagctccgagaggatgtgtcccattttt
caaatctcaaacgttaccggggagaacatggacctgctcaagatgttcctcaacctgctc
tcctctcggacatgctacagagacgaccagccagcagagttccagattgacgacacctac
tctgtaccgggagttggaaccgttgtatcagggactactttacgaggactgatacgtctg
aatgacaccatgctacttggaccggaccctctgggcagcttcatttccatcgctgtcaaa
tcaatccatcgcaagagaatgccagtcaaagaagtccgagggggtcagactgcctcgttt
gcgctaaaaaagatcaagcgttcgaccataaggaaaggcatggtgatggtgtccccaagg
ttgaacccacaggccacttgggagtttgaggcagagattctggttctccatcaccccact
acgatatcaccccgataccaggctatggtccactgtggcagcataaggcagactgccacc
atcttgtccatgaatagagactgcttacggacaggggacaaggcctccgtccacttccgc
ttcattaagactcccgagtacctccactgcgaccagaggctggtgttcagggagggccgc
accaaagctgttggaaccatcacaaaactcctgcagtccaccaataatttgccgtcaaac
tccaaacctccacagataaaaatgcaatccacgaaaaaggcgccgcctcgaaaagacgac
aacaccgccccggcaacaggagacgaaggcttgacgatagcaccgtcggcggggccgagc
acgatgcaacagggagagggggaggaggaccctcagttaaaggagggcaacaaagagaac
aagccaaagagtggaggaggtggaagaagaagaggaggtcagcgacacaaagggaaaggc
caaaacatgtccacagcagcggcctccacatcaggaacaggaggatgctga
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