Syngnathus scovelli (Gulf pipefish): 125983136
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Entry
125983136 CDS
T08785
Symbol
fscn1a
Name
(RefSeq) fascin actin-bundling protein 1a
KO
K23551
fascin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983136 (fscn1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125983136 (fscn1a)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125983136 (fscn1a)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125983136 (fscn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fascin
FRG1
FGF
DUF569
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
125983136
NCBI-ProteinID:
XP_049600062
LinkDB
All DBs
Position
16:complement(1225614..1234173)
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AA seq
544 aa
AA seq
DB search
MRQAEDRGRAFTDTLLKQREARERGTSASHPPLHQIADRSGRSEATMTTNGASNGSSDML
QIQFGLINCGNKYLTAETFGFKINASASSMKKKQIWTLEQSGDESSGNVFLLKSHLGRYI
ATDKDGNVTGDSETSGPECRFIITAHDDGRWSLQSEPFGRYLGGTEDRIICFAQTASVAE
KWSVHIAMHPQVNLFSLTRKRYAHLSSKVDEIAIDRDIPWGVDSTITLVFREQRYHLQTS
DNRFLRNDGALVAATDKSTGYTLEFRSGKVAFRDCGGKYLAPSGPSGTMKSGKSARVGKD
ELFQLEQSHPQVVLTAANERNVSTRQGMDLSANQDEEGDQEVFQVEICRENRKCAFRTAA
GKYWTLTANGGLQCTASTKSANCYFDIEWRGKRLTLRAANGKYVAAKKNGQLAATIDSAG
ESEEFIMKLINRPIIVLRGEHGFIGCRKVTGTLDSNRSSYDYFTLEFRDGAYSLQDSTGK
YWMVGNEQAVVSSSDTPVDFFFEFCDYNKLAIRHGSDGKYVRGDHAGVLKANADDLETAT
MWEY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggcagaggaccgggggcgcgcgttcacggacacactcctcaaacaaagagaa
gcacgcgagcgaggcacctcagcatcccacccccccctccatcaaattgcagacagaagc
ggacggagcgaagccaccatgacaactaacggcgcgagcaacggatccagcgacatgctg
cagatccaattcggtctcatcaactgcggcaacaaatatctcaccgccgagacgttcggc
ttcaaaatcaacgcctcggcctcgagcatgaagaagaagcagatttggaccctggagcaa
agcggcgacgagtccagcggcaacgtcttcctcctcaagtcacatctgggccgttacatc
gccaccgacaaggacggcaacgtgaccggtgacagcgagacttcgggccccgagtgccgc
ttcatcatcacggcgcacgacgacggccgctggtccctgcaatccgagcccttcggccgc
tacctgggcggaaccgaggaccgcatcatctgcttcgcccagaccgcgtccgtggcggag
aaatggagcgtgcacatcgccatgcacccgcaggtgaacctcttcagcctgacgcgcaaa
cgctacgcgcacctcagctccaaggtggacgagatcgccatcgacagggatatcccctgg
ggcgtggactccaccatcacactggtgttccgagagcagcgttaccacctgcagacctcc
gacaaccgcttcctgaggaacgatggcgcgctggtggccgccacggacaagagcaccggc
tacacgctggagtttcgctccggcaaggtggccttcagggactgcggaggcaagtacctg
gcgccgtccggcccctccggcaccatgaagtccggcaagagtgcgcgcgtgggcaaggac
gagctcttccagctggagcagagccaccctcaggtggtcctcaccgcggccaacgagagg
aacgtctccacccgccaaggtatggacctgtccgccaatcaagatgaagaaggtgaccag
gaagtcttccaagtggagatttgccgtgagaacaggaagtgtgcgttccgcaccgccgct
ggcaaatactggaccctcactgccaacggaggcctgcagtgcaccgcctccaccaagtca
gctaattgctactttgacatcgagtggcgtgggaagaggctgactctgcgagccgccaat
gggaaatatgtcgccgccaagaaaaacggacagctagcagccaccattgactctgccggt
gagtccgaagagttcatcatgaagctgatcaaccgccccatcatcgttctgcgtggcgag
cacggcttcatcggctgcaggaaggtgacggggaccctggactccaatcgctcctcctac
gattacttcacgctggagttcagagatggagcctacagcctgcaagactccaccggcaag
tactggatggtgggcaacgagcaggcggtcgtgagcagcagcgacacgcccgtcgacttc
ttctttgagttttgcgactacaacaagcttgccatccgccacggaagcgacggcaagtat
gtccgcggcgaccacgccggcgtgctcaaggccaacgcggatgacctcgagacggccacc
atgtgggagtattaa
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