KEGG   Syngnathus scovelli (Gulf pipefish): 125983137
Entry
125983137         CDS       T08785                                 
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125983137 (gtf2f1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125983137 (gtf2f1)
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     125983137 (gtf2f1)
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 125983137
NCBI-ProteinID: XP_049600063
LinkDB
Position
16:1036731..1040143
AA seq 531 aa
MASLGSSSSSGTEFIVRVPKNTSKKYNIMAFNAGDKVNCSTWTQARMERDMSARKIYGEE
ETPEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQTQGDEEEEESEKSAKKKKKGGGRGNDLRIHDMEDDFDVSSDDSDNSMGEDGEAKT
KTKSDTGKGKSKKKRNDKEALEDSDDGDYEGLEVDYMSDESSSSDEEPEKGRPSKGEDVP
KGIDEASESEEESEEEKHNEEETKEEEEDEEGKKTPAQTEKKKKKDSSGESDSSDDSDIE
GETASALFMVKKRTPPKRAGGRGSAGSSRTGSRPGTPSIDPAATSNTLRAAASKLEQGKR
QTQGPGTDSPAAKRLKMDPSGQSPGPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLIRK
PMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggcatcactggggagcagcagttcttcaggcactgaattcattgtgcgagtccctaag
aatactagcaagaaatacaacataatggcttttaatgccggggataaagtcaactgttca
acatggacacaggctcgcatggagagagacatgagtgctcgcaagatctacggtgaagaa
gagacaccggagggtgcagccggcagcgagtttggcaaaaagcagcgcgaggaggcgcgc
cggaagaaatttggcattgtgacacgcgagttcaaagtggaggaccagccttggattctt
aaagtcaacggcaaggcgggaaaaaggttcaaaggtctgaaaaagggcggcgtcaccgaa
aatgcatcctactacatcttcacccagtgtcccgatggagcttttgaagcctttcctgtg
aacggctggtacaactttaccccggtggccaaacatcgaactctcacggcggaggaggct
gaagaggagtggggcaggaggaacaaggtggtgaatcacttcagcatcatgctccagcga
cgtctacgtgagcaaacgcagggcgacgaggaagaggaagagagcgagaaatcggccaag
aagaagaagaagggcggcggtcgaggcaacgacctgcgcatccacgatatggaagacgac
tttgatgtgagcagcgacgacagcgacaacagtatgggcgaagatggagaagccaagacc
aagacaaagagcgacacagggaaaggaaaatccaagaagaagcgcaatgacaaggaggct
ttggaagacagcgatgatggcgactacgaggggctcgaggtggattacatgtcggatgaa
agcagcagttcggatgaagagccagaaaaaggaaggcccagcaaaggagaagatgtccct
aaagggatcgatgaggcctcggaaagcgaggaagagagcgaagaggagaaacataacgag
gaggaaacaaaagaagaggaggaggatgaggaaggaaagaaaacaccagcccagacagaa
aagaagaagaaaaaagacagcagcggcgaatcggacagctcggacgacagcgacatcgag
ggagaaacggcctctgctttgtttatggtgaagaagcgcactcctccaaaacgcgcaggc
gggcgcggctccgccggaagctccagaaccggcagccggccgggcacgccgtctatagac
cccgccgccacctccaacacacttcgtgccgcggccagcaagctcgagcaaggtaaaaga
cagacgcaaggtccggggaccgactcaccggccgctaaaaggctcaagatggaccccagt
ggacagagccccggcccctctgggaagagcacacctcaacccccatcaggaaaatcaact
cccagttccagcgatgtccagctaactgaagaagcggtccgccgctacctgatccggaaa
cccatgaccaccaaagacctgctgaaaaaattccaaaccaagcgcacaggcctgagcagt
gagcagactgtcaacgtgctggcgcagattttgaaacgcctcaatcctgagcgcaaaaac
gtaaacgataaaatgcatttttatctcactgagtga

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