Syngnathus scovelli (Gulf pipefish): 125983137
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Entry
125983137 CDS
T08785
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125983137 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125983137 (gtf2f1)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125983137 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125983137
NCBI-ProteinID:
XP_049600063
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All DBs
Position
16:1036731..1040143
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AA seq
531 aa
AA seq
DB search
MASLGSSSSSGTEFIVRVPKNTSKKYNIMAFNAGDKVNCSTWTQARMERDMSARKIYGEE
ETPEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQTQGDEEEEESEKSAKKKKKGGGRGNDLRIHDMEDDFDVSSDDSDNSMGEDGEAKT
KTKSDTGKGKSKKKRNDKEALEDSDDGDYEGLEVDYMSDESSSSDEEPEKGRPSKGEDVP
KGIDEASESEEESEEEKHNEEETKEEEEDEEGKKTPAQTEKKKKKDSSGESDSSDDSDIE
GETASALFMVKKRTPPKRAGGRGSAGSSRTGSRPGTPSIDPAATSNTLRAAASKLEQGKR
QTQGPGTDSPAAKRLKMDPSGQSPGPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLIRK
PMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactggggagcagcagttcttcaggcactgaattcattgtgcgagtccctaag
aatactagcaagaaatacaacataatggcttttaatgccggggataaagtcaactgttca
acatggacacaggctcgcatggagagagacatgagtgctcgcaagatctacggtgaagaa
gagacaccggagggtgcagccggcagcgagtttggcaaaaagcagcgcgaggaggcgcgc
cggaagaaatttggcattgtgacacgcgagttcaaagtggaggaccagccttggattctt
aaagtcaacggcaaggcgggaaaaaggttcaaaggtctgaaaaagggcggcgtcaccgaa
aatgcatcctactacatcttcacccagtgtcccgatggagcttttgaagcctttcctgtg
aacggctggtacaactttaccccggtggccaaacatcgaactctcacggcggaggaggct
gaagaggagtggggcaggaggaacaaggtggtgaatcacttcagcatcatgctccagcga
cgtctacgtgagcaaacgcagggcgacgaggaagaggaagagagcgagaaatcggccaag
aagaagaagaagggcggcggtcgaggcaacgacctgcgcatccacgatatggaagacgac
tttgatgtgagcagcgacgacagcgacaacagtatgggcgaagatggagaagccaagacc
aagacaaagagcgacacagggaaaggaaaatccaagaagaagcgcaatgacaaggaggct
ttggaagacagcgatgatggcgactacgaggggctcgaggtggattacatgtcggatgaa
agcagcagttcggatgaagagccagaaaaaggaaggcccagcaaaggagaagatgtccct
aaagggatcgatgaggcctcggaaagcgaggaagagagcgaagaggagaaacataacgag
gaggaaacaaaagaagaggaggaggatgaggaaggaaagaaaacaccagcccagacagaa
aagaagaagaaaaaagacagcagcggcgaatcggacagctcggacgacagcgacatcgag
ggagaaacggcctctgctttgtttatggtgaagaagcgcactcctccaaaacgcgcaggc
gggcgcggctccgccggaagctccagaaccggcagccggccgggcacgccgtctatagac
cccgccgccacctccaacacacttcgtgccgcggccagcaagctcgagcaaggtaaaaga
cagacgcaaggtccggggaccgactcaccggccgctaaaaggctcaagatggaccccagt
ggacagagccccggcccctctgggaagagcacacctcaacccccatcaggaaaatcaact
cccagttccagcgatgtccagctaactgaagaagcggtccgccgctacctgatccggaaa
cccatgaccaccaaagacctgctgaaaaaattccaaaccaagcgcacaggcctgagcagt
gagcagactgtcaacgtgctggcgcagattttgaaacgcctcaatcctgagcgcaaaaac
gtaaacgataaaatgcatttttatctcactgagtga
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