Syngnathus scovelli (Gulf pipefish): 125983257
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Entry
125983257 CDS
T08785
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sscv00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sscv01100
Metabolic pathways
Module
sscv_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125983257
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125983257
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125983257
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
125983257
Glycosyltransferases [BR:
sscv01003
]
O-Glycan biosynthesis
Glycosaminoglycan
125983257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
125983257
NCBI-ProteinID:
XP_049600327
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All DBs
Position
16:complement(7532544..7542483)
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AA seq
898 aa
AA seq
DB search
MKAHACPRRLAVSLRLRSRSGVAAAALAVLLIQTLLVWNFTSLDGSSGGERSGREKRAVG
RDKADWQPPRSGLLRRTESPPQPSQPLELGNAVGRHKLRADIYRSHRPKEKRYLSPDSNN
NENSVPKDLEHVDGGRPGKPHQRPDGKTQNVPAKVAERAVALPRAAIGGWSSTVPPSIAP
SPASVTKCEMGSKEVISALSRAKSRECRQRIADVYCRHKDNVLMPTKLPTYCPLQGKVSV
NIQWDEEDVSERATSSPVRLAFVLVVHGRASRQFHRLFKAIYHTAHFYYIHVDQRSDFLH
REVTLLAGQYTNVRVTPWRMATIWGGASLLAMYLRAMEDLLDMHDWSWDFFVNLSAADYP
VRTNDQLVSFLSKYRHLNFIKSHGRDNTRFIRKQGLDRLFLECDTHMWRLGDRKIPEGIA
VDGGSDWFLLNRAFVEYVIRSTDELVAGLKRFYAFTLLPAESFFHTVLENSALCGSMVDN
NLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPADMPRFLQTSRPTFFARKFEASVSQEI
INQLDAHLFGAPAPGLLGLSAYWENVYERETDGADGLTDAALSHYHAFARLGLERAAAAA
SLRGHTAHDTCRYEATGHPTSVHMYFVSDQFQGYLVRHTALNRASAQTETLETWVTPREL
FSFGGPPNAANRLQHIQVGADWDAKERIFRRRGGPLGPEDEVSAAQHWSRAANNLTATVV
WIDPTNVIAATYDIHVDANADVTHYRPPLVAPLRPGVWTLRILNRWSPLGQTRFLIAPLQ
FRRRRPITQEEARVAHGGPSGRTYMEQSFHGLNPVLRLPLSLNAMEEAEANAGLTGEPLR
RWMDHLLAGFWTAAGVCAAGPAPSACHVLPLCRRTAWSSDSPDPKSQVGPAGLDGRIR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcacgcgtgtccccgcaggctggctgtcagtctccgcctccgctcccggtcg
ggggtagcggccgcagcactggccgtgctgctcatccagactctgctggtgtggaacttc
accagcctggatggctcgtccggcggagagcgaagcggccgcgagaagcgagccgtcggc
cgggacaaagccgactggcagccgcccaggagcgggctgctgcggaggaccgagtcgccg
ccgcagccctcgcagccgctggagctgggaaacgctgtcggaagacacaagctccgagcc
gacatttaccgctcgcaccggcccaaagaaaagcgatatttgtcccctgacagcaacaac
aacgagaactcagtccccaaagacttggagcacgtggacggcggccgcccgggaaagcca
caccagcgacccgacggcaaaacgcaaaacgtgccggcaaaagtggccgagcgagctgtc
gcgctccctcgggcggcaattggtggctggtcgtcgacagtgccgccgagcatcgccccc
tcgccggcatcagtgaccaagtgcgagatgggcagcaaagaagtcatctcggcgctgtcg
cgggccaaaagtcgtgagtgtcgtcagcggattgccgacgtctactgccgccacaaggac
aacgtcctcatgccgactaaactacccacctactgccccctgcagggtaaagtgagcgtg
aacatccaatgggacgaggaggacgtgtcggagcgggcaacgtcgtcgccggtgcgtctg
gccttcgtgctggtggtgcacgggcgtgcctcacgccaattccaccgcctctttaaggcc
atctaccacacggcgcacttctattacatccacgtggaccagaggtcggacttccttcac
cgcgaggtgactctgctggccggccagtacaccaatgtgcgcgtgacgccgtggaggatg
gccaccatctggggcggcgccagtttgctggccatgtacctgcgcgccatggaggacctc
ctggacatgcacgattggtcatgggacttcttcgtcaacctcagcgctgctgactaccca
gtcaggaccaacgatcagctggtgtccttcttgtccaaatatcgacacctcaactttatc
aagtctcacggacgagacaacacccgttttatccgcaagcagggcctggaccgcctcttc
ctggagtgcgatacgcacatgtggcgtctcggggaccgtaaaatcccggaaggcatcgcc
gtggatggcggctccgactggttcctgctcaaccgagccttcgtggaatacgtgatccga
tccaccgatgaactggtcgccggtttaaagcgattctacgccttcacgcttcttcctgct
gagtcgttcttccacacggtgctagagaacagcgccctctgtggcagcatggtggacaac
aacctgaggctgaccaactggaaccgcaagctgggctgcaaatgtcagtataagcacatc
gtggattggtgcggctgctcacccaacgacttcaagcccgccgacatgccgcgcttcctg
caaacgtcgcgccccaccttctttgccaggaagttcgaagccagcgtcagccaggaaata
atcaaccaactggacgcgcacttgttcggggctccagcaccaggcctgctgggcctgagc
gcgtactgggagaacgtctacgagcgggagacggacggcgcagacggcttgacagacgcc
gcgctcagccactaccacgcctttgctcgcttgggcctggagcgtgcggccgccgccgcc
tcgctgcggggtcacactgcccacgacacctgcaggtatgaggcgacaggccaccccacg
tccgtgcacatgtactttgtgtcggaccagttccagggctacctggtgcgccacacggcg
ctcaaccgagcctctgctcagacggagactctggagacctgggtgactccccgggaactt
tttagcttcggcggaccccccaacgctgccaacaggctgcagcacatacaggtgggggcg
gactgggacgccaaggagcgcatattccgccggcgcggcgggccgctggggcccgaagac
gaggtgtcggcggcgcagcactggagtcgtgctgcgaataacctaacggcgacggtggtg
tggattgaccccaccaacgtgatcgctgccacctacgatatccacgtggacgccaacgca
gacgtcactcactaccgccctccattggtggcgccgcttcgccccggcgtctggaccctc
aggatccttaaccgctggagtccgctgggacagacacgctttctcattgctccgttgcaa
tttcgccggcggcggcccatcacgcaagaggaggcacgcgtggcccacggcggcccgtca
ggtcggacgtacatggagcagagcttccacgggctgaacccggtactgcgcctgccgctc
agcttgaacgcgatggaggaagcggaggccaacgccggcctgacgggagagccgctgcgc
cgctggatggaccacctgctggccggtttctggacggcagccggcgtgtgcgctgccggc
cccgccccctccgcctgccacgtcctgccgctctgccgtcgtaccgcctggagctcggac
agccctgaccccaaatcccaagtggggccggccgggctcgatggccgcatcaggtaa
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