Syngnathus scovelli (Gulf pipefish): 125983267
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Entry
125983267 CDS
T08785
Symbol
spns1
Name
(RefSeq) protein spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125983267 (spns1)
Transporters [BR:
sscv02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
125983267 (spns1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
PEMT
LapA_dom
PTR2
Motif
Other DBs
NCBI-GeneID:
125983267
NCBI-ProteinID:
XP_049600339
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All DBs
Position
16:7470174..7474239
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AA seq
508 aa
AA seq
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MSADAPASDAAPFLSDDSEVASAEEEEVEVQCRDAVQNEELSGVTPVRAVLTVLILSYIN
LLNYMDRFTIAGVLPDIERYFGIDDSKSGLLQTVFICSYMFLAPLFGYLGDRYNRKLIMS
VGITFWSVVTLVSSYTPKEHFWALLLTRGLVGVGEASYSTIAPTIIADLYVKDRRTNMLS
VFYFAIPVGSGLGYIVGSQVSNVAKDWHWALRVTPGLGLVAVLLLVLVVQEPKRGAVEAR
SEHQLHHSSWTDDLRALSRNPSFVLSTLGFTAVAFVTGSLALWAPTFLFRAAMFTGERAP
CQEAHCSSSDSLIFGAITCVTGVLGVASGVQISRRLRSRTPRADPLVCAAGLLLSAPFLY
LAVVCAQASTVATYVFIFLGETFLSMNWAIVADILLYVVVPTRRSTAEAFQIVISHLLGD
AGSPYLIGVVSDSLRKRDSFLWQFRSLQLSLLLCAFVAVGGGAFFLATALFIERDRHRAE
NFTPADDEPIRVPKSGRSTLVPVSSVLI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggacgcgcctgcatcggacgcagcgccgtttttgtctgacgacagcgaggtg
gcatcagcggaggaggaggaagtggaagtgcagtgtcgggatgcggtgcagaatgaggaa
cttagcggcgtgacgccagtgcgtgctgtgctgaccgtcctgatcctgagctacattaac
ctgctcaactacatggatagattcaccatcgcaggtgtccttcccgacattgagcgttat
tttggaatcgatgacagcaaatcgggtctgctccagacggtcttcatctgcagttacatg
ttcctggcgccgctctttggttacctgggcgaccgctacaaccgcaagttgatcatgagc
gtcggcatcactttctggtccgtcgtcacgctggtcagctcctacacgcccaaggagcac
ttctgggcactgctgctgacacggggcttggtgggcgtaggcgaggccagttactccacc
attgcgcccaccatcatcgccgacctctatgtcaaggaccgccgcacaaacatgctgtct
gtcttctactttgccattcctgtcggcagtggcctgggctacatcgtgggctcccaagtc
agcaacgtggccaaggactggcactgggctctgagggtgacgccagggttgggtctggtg
gccgtgctgcttctggtcctggtggtgcaggagcccaaacgcggtgccgtagaagctcgg
tccgaacatcagcttcatcacagcagctggacggacgacctgcgagcgctgagcaggaac
ccgagcttcgtgctgtccacgctgggcttcacagctgtggcctttgttacgggctccctg
gcgctgtgggcgcccaccttcctgttcagggcagccatgtttacgggtgaacgcgcgccc
tgccaggaagctcactgctcatcctcggacagtctgattttcggcgccatcacatgcgtg
acgggcgtgctgggcgtggccagcggagtccaaatcagccgtcggctccgaagccgaacg
ccgcgcgccgacccgttggtatgtgctgctggcctcctgctctcggcgcccttcctctac
ctcgctgtggtctgtgcccaggccagcaccgttgccacttatgtgtttattttcctgggc
gaaaccttcctgtccatgaactgggccatcgtggccgacatcctgctgtatgtggtggtt
cctacgcggcgctccaccgccgaggcatttcagattgtcatctcgcatcttcttggagat
gccggaagtccttatctcatcggagtggtgtcggattctttgaggaaacgggattccttc
ctgtggcagtttcgctcgcttcaactttctttgctcctgtgcgccttcgtggccgtcggg
ggcggagccttcttcctggccaccgccctcttcatcgagcgagatcgccaccgagcagag
aactttacccccgcagatgacgagcccatccgggtgcccaaaagtgggcgatccactctg
gttccagtgtccagcgttctgatttga
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