Syngnathus scovelli (Gulf pipefish): 125983282
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Entry
125983282 CDS
T08785
Name
(RefSeq) serine/arginine-rich splicing factor 2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125983282
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125983282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125983282
Spliceosome [BR:
sscv03041
]
Common components
Common spliceosomal components
SR proteins
125983282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_8
RRM_occluded
SET_assoc
RRM_PARP14_3
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
125983282
NCBI-ProteinID:
XP_049600367
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All DBs
Position
16:7477700..7480007
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AA seq
219 aa
AA seq
DB search
MSFYGRPPPDVDGMTSLKVDNLTYRTTPETLRHVFEKYGRVGDVYIPRDRYSKDSRGFAF
VRFNDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYSGGRRGSCGGGGGGGGGPP
RRYGGSSRRSRSPRPRRRSRSRSRSRSRSRSRSRYSRSRSRSYSRSKSRSPRNKKTNARS
RSRSRSRSASRSVSPPKRGSGSRSKSPPKSAAENGGDSP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttacggaaggcctccgcctgacgtcgacggcatgacttccctcaaagtggac
aacctgacgtaccgcaccacgccggagaccctgcggcacgtcttcgagaagtacggccgc
gtcggggacgtgtacatcccgcgagaccgctactccaaggatagccgcggcttcgccttc
gtccgcttcaacgacaagcgtgacgcggaggacgccatggacgccatggacggcgcgctt
ttggacggacgtgagctgcgcgtccagatggcccgctacggcagacctccggattcgcat
tacagcggcgggcgtcgtggaagctgcggcggtggcggaggaggaggaggaggcccacct
cgaaggtacggaggctccagtcgccgaagcagaagcccccgaccaagaagacgcagcagg
tcccgctctcggtcccgctctcgctcccgaagccgatcccgttacagccgatcccgctct
agatcttactccagatccaagtcccgctctcctcggaacaagaagaccaacgcaaggtcc
cgctccaggtcccgctccaggtccgccagtcgctccgtctcccctccaaaaagaggctct
gggtccagatctaaaagcccgcccaagtcagccgctgagaatggaggagactcaccctag
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