Syngnathus scovelli (Gulf pipefish): 125983295
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Entry
125983295 CDS
T08785
Symbol
ift70
Name
(RefSeq) intraflagellar transport protein 70A
KO
K19683
tetratricopeptide repeat protein 30
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125983295 (ift70)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125983295 (ift70)
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
ANAPC3
TPR_16
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_6
TPR_9
ARM_TT21_C
TPR_Slam
ARM_TT21_2nd
DUF285
Motif
Other DBs
NCBI-GeneID:
125983295
NCBI-ProteinID:
XP_049600385
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All DBs
Position
16:8026003..8032637
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AA seq
648 aa
AA seq
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MMTIKDGEYTATIYKLIKDSQYVEAIHILNSQLQKHTRSRAALSLLGFCYYHVQDFSGAA
ECYEQLTQLHPEVEEYRVYYAQSLYKAGAYAEATKASFALDTPSSHTKMIKLQASIKYFE
ENYSAAKSLVEQLPPEDADYVYNMGCLLYQDAKYEDACKKFTSAMQVLGYVPALSYNIAL
CYYRLSNYAQALKYIGEIIERGIREHPELSVGLTTEGIEVRSVGNTLVLHQTALVEAFNL
KAAIEYQLKNLKGAQEALTDMPPRTEEELDTVTLHNQALLNMDSKPSQGFEKLAFLLQQP
SFPPVTFGNLLLLYCKHEYFDLAADVLAENAHLTYKLLTPYEYEFLDALLTCQTAPEEAF
RKFDDMIGKMTEKLRKLAKQLQEAKTVRDDDGQKKALQEYDTMQEKYIVVLMAQAKIYWN
RENFAMVEKIFHKSMEVCNEDDTWKLNVAHVLFMQNKYKEAISFYEPIVKKHYNNILNVS
AVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVFHLCIVNLVIGTLYCAK
GNYDFGISRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMSKHIITLKGVVVQECIQFLE
NCEEYGREVPAIIEQPLEESGVQMGKNTVTYEARLLKALFYKVTSWNE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaataaaagacggggagtacactgctacaatctataaactgattaaagacagc
cagtatgttgaggccattcacatccttaacagccaacttcagaagcacacgagatctcgg
gcagcactgtccctgctgggcttctgctactaccacgtccaggacttcagcggtgcggcc
gagtgctacgagcagctcacgcagctgcaccccgaggtggaggagtaccgggtgtactac
gcccagagcctgtacaaggcaggcgcctacgccgaggccaccaaggcatccttcgccctg
gacacgcccagcagccacaccaagatgatcaaactgcaagcctccatcaaatattttgag
gagaattactcagctgctaagtctctggtggagcaacttcccccggaggacgccgattac
gtgtacaacatgggctgcctgctctaccaggatgccaaatacgaggacgcctgcaagaag
ttcacgtcggccatgcaggtgctgggatatgttcctgcgctgtcgtacaacatcgctctg
tgctactacaggctcagcaactatgcgcaggccctcaaatacatcggcgagatcatcgag
cgtggcatacgggaacatccggagctgagcgtgggcctgaccacggagggcatcgaggtg
cgcagcgtgggcaacacgctggtgctgcatcagaccgccctggtggaggccttcaacctc
aaggctgccatcgagtaccagctgaagaacctgaaaggagctcaggaggctttgacggac
atgccgccgagaaccgaggaggagctggacacggtgactctgcacaaccaggctctgctc
aacatggacagcaagccctcacaaggcttcgagaagttggccttcctactgcagcagcct
tccttcccacccgtcacattcggcaacctgctactgctctactgcaagcacgagtatttc
gatctggctgccgacgtcctagcagaaaacgcacacctcacctacaagttgctcacaccg
tacgagtacgagtttctcgatgccttgctgacctgccagacggcgccggaggaggccttc
agaaagtttgacgacatgatcggcaaaatgacggagaagctgcgcaaactggccaagcag
ctgcaggaggccaagacggtccgagacgacgacgggcagaagaaagccctccaggagtac
gacaccatgcaggagaagtacatcgtggtcctgatggcccaggctaaaatctactggaac
cgcgagaactttgccatggtggagaagatcttccacaagtctatggaggtgtgcaacgag
gacgacacgtggaagctgaacgtggcacacgtgctcttcatgcagaacaagtacaaggag
gccatcagcttctacgagcccatcgttaagaagcactacaacaacatcttgaatgtgagc
gctgtggtcctggccaacttgtgcgtgtcctacatcatgaccagccagaatgaagaggct
gaggagctgatgaggaagattgaaaaggaggaagagcagatctcctacgacgaccccgac
aagaaagtcttccacctatgcatcgtcaacctggtcatcggcacattgtactgtgccaag
ggcaactacgattttggcatctctcgtgtcatcaagagcttggaaccttacaacaagaag
ttggggacggacacgtggttctacgccaaacgctgtttcctgtccctgctggagaacatg
tcaaagcacatcatcacgctgaagggggtggtggtccaggagtgcattcagttcttggag
aactgtgaagagtatggaagggaggtgcccgccatcatcgaacagccactggaggagtcc
ggggtccaaatgggcaagaacactgtgacgtatgaggcccgactcctcaaggccctcttc
tacaaagtcacaagctggaatgagtga
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