KEGG   Syngnathus scovelli (Gulf pipefish): 125983341
Entry
125983341         CDS       T08785                                 
Name
(RefSeq) integrin alpha-3 isoform X1
  KO
K06482  integrin alpha 3
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510  Focal adhesion
sscv04512  ECM-receptor interaction
sscv04810  Regulation of actin cytoskeleton
sscv04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125983341
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125983341
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125983341
   04810 Regulation of actin cytoskeleton
    125983341
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sscv04147]
    125983341
   04515 Cell adhesion molecules [BR:sscv04515]
    125983341
   04090 CD molecules [BR:sscv04090]
    125983341
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125983341
Cell adhesion molecules [BR:sscv04515]
 Integrins
  Integrin alpha subunits
   125983341
CD molecules [BR:sscv04090]
 Proteins
  125983341
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_1 FG-GAP_3
Other DBs
NCBI-GeneID: 125983341
NCBI-ProteinID: XP_049600460
LinkDB
Position
16:7264948..7273570
AA seq 1047 aa
MATCMCLVVSVYVLACAASNVDTRFPLLKTGVDGTFFGLSVALHLDLKSRTHLLLVGAPR
EMAEADVPANRTGGVYICPLTGNQSDCKRLSLIKTNLEPSEDMVEDMWLGVSLASQGPPG
GRVLACGHRFVKIYGASKLRHMIGRCYLRGNDLRHADADDQWRTPEQVCSHLGDVSGEVM
CNSGMSAAIFRHDIIIGSPGSYQWQGNVHVSWNNPDVAFDTRRSAFPNLQRRNIYLGYSV
TQAAGLLSQDDVTIVTGAPKDTKEDARGSVLLAVKNGTGSALAIRQTLRGEQTGSYFGNA
VAAADLDNDGWCDLLVGAPFYFRRQQEVGGAVYVYMNAGGRFHSMPTLVLKGPPASAFGM
AVAHAGDLDRDGFQDIAVGAPFQGTGSVLIWRGSSAGLSTQPSQVITGSSLSTRFSTFGF
SLSAGLDVDGNKHPDLLVGSLDDTAVLLRTRPVIHLNQTIRVSPNIVDPNTCDFCVEVEL
CFSYTRSTGKMHQRDNITVHFSVAADVSSLKPRLRFRGNGQSVYSGFLLVPEHRCKTLSV
GLLTPVRDQVEALVFSLNASLHQKIPKNKDPLQDLASFPVLSRRPQPVRTQVHIQKSCGS
DYLCHSNLQMTAHFTDSRQQPLSTCSGRQVWFYEGGADRLLLAVNISNTEEDAHLAVLNV
TIPPALVYSGVRTKGGVQKVQCSVEGSVVLCEIGNPFKSNQTVEVWIILEPSEISWDTRD
VELLLQMSTLSEQTDLTPVWISLMVNFSVDISLMLTHQPGPTPFSGHVLGESAMKTTQDV
GPLLLFTFQVHVGGWPLGRRGNLELAFDWPSELSNGKRLLYLTEITLNGSAESRCVPSGD
VINPLRLKLSREELERWARRNPDQEKEARNDEGVLRGPPRSNKSYILDCVNGGAKCVQFS
CQLSHVKKSASVTLRARLWKATMLEHYMDARAVLIRGKATLRLGVINMEPPGAQMEVYAY
PDLERQMDSGAPLWMILASILVGLGLLALICMLLWKCGFFVRSRTWRAAAQHRGRIVPAE
ERHACQDAVLATSRTKPKRWRTWTAVG
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggcgacatgcatgtgcctggtggtgagcgtgtatgtgttggcatgtgcggcgtccaac
gtggacacgcgcttcccgctactcaagacaggggtggacggaactttttttggactttca
gtcgctctgcatcttgacctcaagtcacgcacgcaccttctattggtcggcgctcccaga
gagatggcggaggcggatgtgccagccaatcgaacagggggcgtgtacatctgcccgctc
actggtaaccaatcggattgcaagaggctatcgctcatcaagacaaacttggagccgtcc
gaggacatggtggaagacatgtggctgggcgtgtcacttgccagtcaggggccacccggg
gggcgggtcctggcatgcggccatcgatttgtgaaaatttacggcgcgtccaaactccga
cacatgattggtcgctgttatctccgtggcaacgaccttcgccatgcagatgctgacgac
caatggcggacacctgagcaggtgtgcagtcacctgggcgacgtgagcggggaggtcatg
tgtaactcgggaatgtctgccgccatctttcgccatgacatcatcatcggatcacctgga
agttaccaatggcaaggaaacgtccatgtgagctggaacaatcctgatgttgcctttgac
accaggaggagcgccttcccaaacctgcagcgaaggaacatctacttaggctattcagtc
actcaggcagcgggtcttctctcacaggatgatgtcaccatagtaacaggtgctccaaaa
gacactaaagaggacgctcgcggttctgtgctgctggcagtcaaaaatggcaccggcagt
gcgctagccatccggcagacgctgcgaggagagcagacgggttcgtacttcgggaacgcc
gtggctgccgcagacttggacaacgacgggtggtgcgacctgctggttggcgcgcctttc
tacttccgccggcagcaggaagtgggaggcgcggtatacgtgtatatgaacgcagggggg
cgctttcactcaatgcccactttggtgctgaaggggccgcccgcttcggcgtttgggatg
gccgtcgcccacgccggggatctcgaccgagacggctttcaggacattgcggtgggcgct
ccgttccaaggaacaggaagcgttctgatctggcgcgggagcagcgctggcctctccacg
caacctagccaggttatcaccggcagcagtttgtcgactcgcttctccactttcgggttc
tcgttgtctgccggactggacgtggatggcaacaaacatccagaccttctggttggctct
ctggatgacaccgccgtccttctcagaacccgtccagtgatccacctcaaccaaaccata
agagtgtccccaaacatagtggaccccaacacttgtgacttttgtgttgaggtggagctt
tgtttctcgtacacgcggagtactggcaagatgcaccaacgagacaacatcaccgtccat
ttctccgtggccgccgacgtcagcagcctgaagccccgcctgcgtttccgtggcaatggt
cagagcgtgtactccggcttcttgctggttcctgagcatcgctgcaaaactctaagtgtc
ggattgctgactccggtccgagaccaagtggaagcgttggtgttctcgctcaatgcgtct
ctacaccagaagatacccaagaacaaagaccccctccaggacctggcatcttttcccgtg
cttagccgcagaccccaacccgtccgaacccaggttcacatccagaagtcgtgcggttct
gattacctttgccacagcaatctgcagatgacagcccatttcacagactccaggcagcag
ccactgagcacgtgctctggtcgtcaggtgtggttctacgagggtggtgcagaccgtctt
ctgttggcggtcaacatcagcaacacagaggaggacgctcacttggccgttctcaacgtt
accatcccgcctgcgctggtctactccggagtccgaacaaagggtggtgtccagaaagtc
caatgttctgtggaaggttctgtggtactctgcgagattgggaacccattcaaaagcaac
caaacggtcgaagtgtggatcattttggagccgtcagagatcagttgggatactcgggat
gtggagctgctactgcagatgtccacactcagcgaacagacggacttgactccagtttgg
atctccttgatggtcaacttctcggtggacatttccctcatgttgacccatcagccaggc
cccacccccttcagcggtcacgtgttgggcgagtctgccatgaagaccacgcaggacgtg
ggtcctctgcttctcttcaccttccaggtgcacgtgggcggttggccactgggtcgccgg
ggcaacctggagctggcgttcgattggccaagcgagctgtccaacgggaagcggctgctc
tacctgactgagatcacgctgaacggaagcgccgagtctcgatgcgttccctctggcgac
gttatcaacccgctccgccttaagctttccagagaggaactggagaggtgggcaaggcgg
aatccagaccaggaaaaggaagcaaggaatgacgagggagtgttacgcggcccacctcgc
agcaacaaatcttatatcctggactgcgtgaacggcggtgccaagtgcgtgcaattttca
tgtcagttgtcgcacgtgaagaagagcgccagcgtgacgctgcgagcacgcctgtggaag
gccaccatgttggagcactacatggacgccagggccgtgctgatccggggaaaggccact
ctcaggctgggggtcatcaacatggagccccccggtgcacagatggaggtctacgcttac
cctgacctggagaggcagatggacagtggcgcccccctgtggatgattctggcatccatc
ctggttggactgggcctgctagcgcttatctgcatgctgctgtggaagtgcggcttcttt
gtgcgcagtcgcacatggcgagcagcggcgcagcaccggggtcggatcgtgccagcggag
gagcggcacgcgtgccaggacgccgtcttggccacaagcagaaccaaacccaaacgctgg
cgcacctggaccgctgtgggctaa

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