Syngnathus scovelli (Gulf pipefish): 125983385
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Entry
125983385 CDS
T08785
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125983385 (recql5)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125983385 (recql5)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125983385 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SRI
Helicase_C
RecQ_Zn_bind
ResIII
TFIIS_M
RecQ5
Motif
Other DBs
NCBI-GeneID:
125983385
NCBI-ProteinID:
XP_049600539
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All DBs
Position
16:3618028..3625343
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AA seq
958 aa
AA seq
DB search
MEARDTTITLKQALNTHFGFDGFRSKVQENVINAVIRGDRDVFVCMPTGAGKSLCFQLPA
VLAAGITLVISPLIALIQDQVDHLRALNIPACSINSKLAVGERRLILTDLQSANPKLKLL
YITPEMVASPSFQPYLTDLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARLPGI
PCIALTATAPKKVQEDIAQSLKLHQPLSFTTPVFRNNLHYDVIFSELLPNPYDHLHAFIK
KALGGVSKAQGCGIVYCRTREGCETVAYQLTKLGVLAKPYHAGLKPGDRTEAQADWMAGK
VGVIVATISFGMGVDKANVRFVAHWNLAKSMASYYQESGRAGRDGLPSLCRIYYSRKDKD
QILFLINQEVARKRDKRGYAKESDNTAITDFDAMVRFCEQESCRHATISKFFGDQPPDCA
GACDYCSNPKGVRAQLEAAYSTSIAAPSKEPKKPFGFDQELYGGGRKGYGFERYDEIAES
VIDDDAKRKKEFSDLFRKQMSMRKGHDYGNDDFIPPDADCPLKEANSQRIPKLPVKAREH
CLTLLQEALYGHQGADDSFGGLSLAVDIEHEVFKRSKSSNLYKAAILKKVSELKKAPAGG
DEEKSIGGRETTVTQEDKASPSTSFSEDLHGFKSASEVYSMKRKRIGAGYCGSSNARAEK
QQPRGSTVDNESVQETPNGNSVGGIGLSLLSKCDKPLPVTSSIRARTNSADSASLSSPTK
RTWSKKQQKLEEAAKHSHSISHYFAKSQTIKESQETSIVISDEDLDPQQNSPEGGAIEPV
IGDVMPAQTRLGVIVIDEFSDEGGTPAQTSQLNPLEHNTTEEHNAAATQEAHSEEAIPEQ
PPAKRSRLVDKSDVQKRTVKEPTETVTLKEAADVVVRYLDPFYTRGKFASKDLFKSFARY
LSHLLAEGGTLKKGQVKTEAKSLIKHFFCKVKRCESEADWKHLKRPDYCKNSANQQRL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgagacacgacaataacactaaaacaagctttaaatacccattttgggttc
gacggcttcaggtctaaagtgcaggaaaatgttatcaatgcagttattcgaggggacagg
gatgtgtttgtgtgcatgccgactggcgcaggaaagtccctgtgtttccagttacctgct
gtactggctgcaggcatcactctggttatctcaccattaatagctcttattcaggaccaa
gtggatcacttgagagctctaaacatccctgcttgctccatcaactctaagctcgcagtc
ggcgagcgtcggttgattcttacggatttgcagagtgcaaacccaaagctcaagctactc
tacattacaccagagatggtagcttctccatcattccagccttacctgactgacttgtgc
tcccggggcttgctgtcctacctggcagtggatgaggctcactgcgtctcccaatggggt
catgatttcagaccagactacctcaaactgggcgaactgcgtgctcgcttgccaggcatt
ccctgcatagcgcttacagcaacagctcctaaaaaggtccaagaagacattgctcagtcc
ctgaagctgcatcagccgctgtcttttactacgccagtttttcgcaataatttgcactat
gatgtcatcttcagtgagcttcttccaaacccctatgatcatctccatgctttcattaaa
aaagcacttggtggtgtctcaaaagcacagggttgtggcattgtctactgtcggacaagg
gaaggttgtgaaactgtagcctaccagcttaccaagctcggtgtcctggcaaagccttat
catgctggtctgaagccaggagatcgtacagaggcccaggctgactggatggcgggaaaa
gttggtgttattgtagccaccattagttttggtatgggtgtcgacaaggccaatgtaagg
tttgtcgcccattggaacctggcaaaatccatggccagctactaccaagaatctggacga
gcaggcagagatggactgccgtccctttgtcgcatttactactcccggaaagataaggat
caaattctgttcctcatcaatcaggaggtggcacggaaaagggacaaacgaggttatgca
aaggaatcggacaacacggccataacagactttgacgccatggttcgtttttgtgagcag
gaaagttgccgccatgctaccatttccaagtttttcggggaccagccgccggactgcgcg
ggtgcttgcgactattgctccaacccgaaaggtgtgcgagctcagctggaagcggcttac
agcaccagcatcgccgctccaagcaaagaaccaaagaaaccgttcgggttcgatcaagag
ctttacggaggaggaaggaagggatatggctttgagaggtatgacgaaatcgcagaaagt
gttattgacgacgacgccaagaggaaaaaggaattctctgacctcttcaggaagcagatg
agcatgaggaagggacatgactatgggaacgatgactttattcctccagatgccgactgc
ccactgaaagaggcaaacagtcagcggatccccaagcttccagtaaaggctagagaacac
tgcctgacacttttgcaagaggcactgtatggccaccagggggcagacgactcttttggt
ggtctgtctttagctgtggatattgaacatgaggtgttcaagagaagcaagtcgtctaac
ttgtacaaagcggcaatactaaagaaggtgtctgagttgaagaaagcaccagccggagga
gatgaggagaagagcatcggtggtcgcgagaccacggtaacacaggaagacaaagcctcc
ccttctacttccttttccgaagacctgcatgggttcaaatctgcatcggaagtctactca
atgaaacgaaagagaattggagcaggttattgtggctcgtccaacgcacgagctgaaaaa
caacagccgagaggctcgacggtggacaacgagtctgtccaggaaacaccaaatggtaac
tcagttggcgggattggactgagtctgctcagcaaatgtgacaaaccattgcctgtgacg
tcatcgatccgagcgagaacaaactccgccgactctgcctccttgagcagccccacaaag
agaacctggagcaagaagcagcagaaactggaggaagctgcaaaacattctcacagcatt
tctcactattttgccaagtctcaaacaattaaggaaagccaagagaccagcatcgtgatt
tcagatgaagaccttgacccacagcagaactctcctgaaggtggtgctattgagccagtt
attggggatgtgatgccagcacagaccagacttggagtcatagtcatagatgaattcagt
gatgaaggagggacgcctgcacaaacgtcacaactgaatccactcgaacataacacaaca
gaagagcacaatgcagccgcgacacaagaggcccactctgaagaagcaataccagagcag
cctccggcaaagcgaagccgtctggtggacaagagcgacgtgcagaagagaaccgtgaag
gagccaacggagaccgtgacgctgaaagaggcggctgacgtggtagtccgctacttggac
cctttttacactcgggggaagtttgccagcaaggacctcttcaagtccttcgctcgctat
ttgtcccaccttcttgcagagggggggactcttaaaaagggacaagtgaaaacagaggcg
aagtctctcatcaagcacttcttctgcaaggtcaaacgctgcgagagtgaagcggactgg
aaacatcttaaaagaccggactactgtaaaaactcagctaatcagcaacgactatga
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