Syngnathus scovelli (Gulf pipefish): 125983467
Help
Entry
125983467 CDS
T08785
Symbol
tenm1
Name
(RefSeq) teneurin-1
KO
K24473
teneurin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125983467 (tenm1)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
125983467 (tenm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
EGF_Teneurin
Ten_N
GBD_Tenm3
Teneurin_ABD
TTR_TEN1-4
Tox-GHH
FN-plug_TEN1-4
EGF_2
NHL
RHS_repeat
CarboxypepD_reg
JAG1-like_EGF2
EGF_DL_JAG
SGL
Motif
Other DBs
NCBI-GeneID:
125983467
NCBI-ProteinID:
XP_049600635
LinkDB
All DBs
Position
1:17601076..17777353
Genome browser
AA seq
2758 aa
AA seq
DB search
MEEMDSKPYQPLSKGRHEMEMSYTSSSDESEDGHAHQRSYTSRETLPDYTHELRLTLGSH
RERQNNYSQAQPDLDFCNAVQMRSPEFVHQQQQQNHHRQEEEEEETLCTGPTAHIHSRGY
SLGVGSDVDTEPEVEPSPAHGLQHMWMRGLKSEQSSCLTSRANSALSLTDTEHDRKSEPD
NELPSSPGGQFTFRPLPPPPPPPHACTCARPAPYTQVSLQRKTMPTRCQGSQGAQGAESS
ACTEQAQLHDSWVLNSNIPLETRHFLFKQGSGSSALLSGAGQGYPLTSGTVYSPPPRPLP
RSSVTRPLFTFNKPHRCCNWKCTALSASLLTLTLALLLTYVIAVHLLGLTWHLQHGESQL
YENGVSSADHQQEDRKTRPTSSIHLLDTLNPENTQASDREKWVRGRAIDRGEVDIGTQQN
QAIPPGVFWRFHMTVHHPSHIKFNLSLSHNALLGVYGRRNIPPTHTQFDFVKLLDGKALP
RSLSDPVSAGKSPKGLLLSGLQETRFIEYMDPGTWHLALYNDGRNLEQVLLHSTPIDTVD
GCSKGCNGNGECVAGRCHCFAGFMGPNCAKDLCPVLCSGNGVYEKGRCVCLDGWKGAECN
VEDGQCIDPTCSNHGSCMHGVCICSPAYKGVNCELVDCVDPQCGGHGVCVRGECVCSPGW
AGVSCEDPLPACQEQCSGHGTYLPESDTCACQPNWTGPDCYIELCPVPCGSHGVCSEGQC
QCEEGWLGVACDQRACHPRCEEHGQCHDGTCICQPGWEGEHCNIVAHDLDIVVKDGCPGL
CSGHGRCTLEQSGWRCVCQAGWSGPGCSVVMETDCSDGKDNDGDGLIDCVDPDCCEQLSC
GSDPLCRGSTDPMALLQRSPLPPTAPPSPINTHTHSFYRRIHFLLGKAATHTLPGEVPFD
TSRVAVIRGHVALQDGSSLVGVNITFPQHPEYGYTISRQDGSYDLVTLGAMSVTLMFQRP
PFLPQTRTVWTPNNNFLVLDQVIMSREDVQPPKCDIRAVLSPYPLVLPYPLPRYTGTCAE
KGPAVPELQAVQEEVAIPGAFMKLNYLSTRAAGYLSLLRILLTPPSASSPISPQGGLSKV
HVKASVQGRLYQRWYPAGPGLVHKLVWNKTDVYGQEVWGLTHATVSVGYEYESCPGVIQW
ERRTALMQGFEMVPSHLGGWSLDKHHSLNIRSGILHKGNGENVFLSQQPEVIATVMGNGF
YRSVPCGPSCSGAARDLMLYAPVALSSGPDGSLYVGDFNFIRRVHPDGYTRTILELKNRD
TRHSTSPAHKYYLAMDPMGEVLYVSDTSSRRVYRVRNLGQPKDPSRNLEVVAGTGEQCLP
FDQTHCGEGRKATEAALNNPRGIAVDKKGVVYFVDGTTIQKINERGLLSTMIGSNGLMST
QPLSCDARMDINQVRLEWPTDLAINPLDNSLYILDNNIVLQVSETLQVRIVAGRPIHCQV
PGIDHHLMSRAAVRATLEAAKAIAMSHLGTLYIAETDERRINRIQQVSTNGEISVISGAP
TDCDCKIDPNCDCFSGDGGYARDARLKAPSSLAVGPNGTLYIADLGNIRIRAVSPNKPQP
GPAGIVEISSPLDQELYLFSQNGSHLYTKHLITGHYLYNFSYGRDGLLSTVTGRDAHALQ
VKRDAHGVPLWLALPGGQVYRLSLSNSGTLRKISAQGHDIAHIIYHGNTGLLATKSDENS
WTTVYDYNNEGRVTNITLPTGDVRGFHGNLDRWSRVEVEASNRENFVTSTNLSASDTIYT
FKRDHAQSSYKVNADGSFFVSLASGMELSLSTEPFLPGGVGGGVSPIASRCNISLPGDHA
PSLIEWRQRKEQSKTNYSTYERRLKAHNRNLLSIDFDQSTRVGKIYDDHRKFTLHIQYDI
LGRPVVWSPSSKYTEVNVSYSGGGLLSAIHRGEWFERLKYENDKVVSRAWVNGKIWSYTY
IDRSVMLLLHSQRRYVFEYDQTDRLIAVTMPSMAKHNLHSLLSIGYYRNMYTPPDSLASF
LQDYTLDGRLLRTQYLGTGRSVIYRYTPAARLSEVTYDSTLVTFTYDEASGSVKTIHLTH
NGFISSIRYRQTGPLTSRQIFRFSEEGLVNARFDYSYNNFRVTSMQAVINETPLPIDLYR
YVDVSGRVEQFGKFSVIFYDLNQVITTHLMKHTKVFNSYGQVVEVQYEILKSIAYWMTIQ
YDSAGRTTTCDIRVGVDSNVTRYTFEYDADSQLQSAAVNERPQWRYSYDLNGNINLLSHG
TSARLVPLRYDQRDRITHLGEIQYSVDEDGFLRQRASDLFDYNSNGLLMRVFNRASKDSV
WYRYDGLGRRVATMTSQGEQLQFFYADLSHPTRVSHLYNHSSSLITSLYYDLQGHLIAME
LSSGEEYYVACDSVGTPRAVFSSKGRLVKEILYTPYGEVYQDTNPDFQLIIGFHGGLYDP
LTRLVHLGRRDYDTLAGRWTSPNHELWTELSKEPRPFNLYAFKNNCPVGRVEEVTQFTTD
IGSWLQLFGFQLHNVVPGFPKPEISPMEQTYELMKTQTKTQDWDSSKVVLGIQCELRRQL
RRFISLERLPLVSAPVGSTCHRPTRPPPFGSRPFLLGPSIRFAVSHGRVSAEVIGVASED
SRRVAAILNGAVHLDGLSFTVHGCDTHHFLQSRPIEEDLALGLGVGGRVLESGVNVSVSQ
MSATVNGRTRRFADITLQQGALCLCIRYGGNEEEERARVREEARRRAVEGAWYHERKRAE
LGDVGGRTWSDVEKQQLLSAGRVQGYDGYYSLPIEQQPELSDCPYNIHFMTLSEVGGR
NT seq
8277 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatggacagtaaaccctaccagccgctgtctaagggccgtcatgaaatggag
atgtcctacaccagttcatctgatgagagtgaggacggtcacgctcaccaacgctcttac
acctcccgtgaaaccctgcctgactacacacatgagctacgcctcacgcttggatcacac
cgtgaaagacagaacaactacagccaagctcagccagatttagatttctgcaacgctgtt
cagatgaggagtccagaatttgtccaccaacagcagcaacagaaccatcatcgtcaagaa
gaagaagaggaggaaacattatgcactggtcccaccgctcacatccacagccgcggctac
tccctgggcgtaggttcagatgtggacactgagccggaagtggaaccatcacccgctcat
ggcctgcagcacatgtggatgcgtggcttgaagtctgagcagagctcctgcctgacaagc
cgcgccaactctgccctgtctctcaccgacaccgagcatgacaggaaatctgagcccgat
aatgaattacccagcagtccaggtggccaattcacatttcgaccattaccgccacctcct
ccaccgccccatgcctgcacctgcgcacgcccggcaccctacacccaagtcagtcttcag
aggaagaccatgccgacgagatgtcagggcagccagggcgcccagggggcagaaagcagt
gcatgcacggagcaggcacagcttcatgacagctgggtgctgaacagcaacattccctta
gagaccagacacttcctgttcaagcaaggctcaggctcatcagccctgctttcaggtgca
gggcagggttaccccttgacctctggaacagtgtactcacctccgcccaggcccctgccc
cgcagcagtgtgaccagaccactgtttactttcaacaagcctcatcgctgctgcaactgg
aagtgcacagcattgtctgcatcactacttacacttaccttggctctgctgcttacatac
gtcattgcggtccacctgttaggtctgacctggcatctgcagcatggcgagagccagctg
tatgagaatggtgtgagctcagcagaccatcaacaggaagaccgcaaaactcgacctacc
agttccatccacctgctggatacactcaaccctgagaacacacaagccagcgacagagaa
aagtgggtgcgcggacgggccattgaccgtggcgaggttgacattggaacacaacagaat
caggctatcccaccaggagtcttttggaggtttcatatgactgtgcaccatccatcccac
atcaagtttaatctctcgctctcccataacgcactgctgggagtctatgggcgcaggaat
ataccaccgacacacacacagtttgactttgtgaaactgctggatgggaaggcactgccc
aggtctttgagtgatcctgtttcagctggcaaatcacctaaaggtctgctgttgagcggc
ctccaagaaacgcgttttattgagtacatggaccctggcacctggcatctggctctctac
aacgatggccgaaaccttgagcaagtcttacttcacagcactcccatagatacagttgat
ggatgctccaaaggatgtaacggaaatggagaatgtgttgctggacggtgccattgcttt
gcaggattcatgggtcctaactgtgccaaagatttgtgccccgtgttgtgcagcggtaac
ggcgtgtatgagaaaggaaggtgtgtgtgcctggacggttggaagggagcagagtgtaat
gtggaggatggtcagtgtattgaccccacctgctccaaccatggctcctgcatgcacggc
gtctgcatatgcagccctgcctacaagggggtaaactgtgaactagtggactgcgtagac
cctcagtgcggtgggcatggcgtgtgcgtccgcggggagtgtgtgtgctctccaggctgg
gcgggagtcagctgtgaggacccgttgccagcgtgtcaggagcagtgttcaggacatggc
acctacctccctgagtcagacacctgcgcctgccaacccaactggacgggaccggactgc
tacattgaattgtgcccggtgccgtgtggcagtcatggtgtttgctcagagggccagtgc
cagtgtgaggagggttggctcggtgtggcgtgtgaccagagagcgtgccatcctcgctgc
gaagaacacggccagtgccacgatgggacttgcatctgccaacccggctgggagggagag
cactgcaacattgttgctcatgatttggacatcgttgtgaaagatggctgcccagggttg
tgcagcgggcacgggcgctgtaccctggagcagagtggctggcgctgcgtctgccaggct
ggatggagcgggcctggatgcagcgttgtcatggaaactgactgcagtgatggaaaagac
aacgatggagatggtttgattgactgtgtggatccggactgttgcgagcagctgagctgt
ggctctgaccctctatgccgtggctcgaccgaccccatggccttgttgcagcggagcccg
ttgcctccgactgcacccccctcacccattaacacacatacgcacagtttctaccgccgc
atacactttctccttggcaaagcagccacacacactctccctggagaagtgccctttgat
accagtcgtgttgctgtcattcgaggccacgttgccttgcaagatggctcttcattggtt
ggtgtcaacatcacctttcctcagcatcctgagtatggttacaccattagtcgacaggat
ggaagttatgacctggtgactttgggtgcaatgtcggtgactctgatgtttcaacgcccg
cctttcctgccacaaacacgcactgtgtggaccccaaacaacaacttcctggttctggat
caagtcattatgtccagggaagatgtgcagcctccaaaatgtgatatcagggctgttttg
agtccttatcccctggtgctgccatacccacttcccagatacacaggaacatgtgcagag
aagggtcctgctgtaccagagcttcaggcagtacaggaagaagttgcaattccaggagcc
ttcatgaagctgaactatttgagtacccgagctgcaggttacctctccttgctgcgtatc
ctcctcacacctccatcagcatcctcgcccatctcacctcagggtggtctctctaaagtg
catgttaaagcttcagtccagggaaggttgtaccaacgctggtaccctgctgggcctggt
ctggtccacaaactggtctggaacaaaactgatgtttacggccaggaggtgtggggcctc
acccatgcaactgtatcagtcggctatgagtatgaatcgtgtcctggagtgattcaatgg
gagaggagaacagctctcatgcagggctttgagatggtgccctctcacctcggaggttgg
tccttggacaaacatcattccctcaacattcgtagcggaatcctccacaagggaaatggg
gaaaacgtcttcctctcccagcagccagaggttatcgccacagttatggggaacggattc
tatcggagcgtcccctgcgggccaagttgcagcggtgcagcccgtgacctgatgctatat
gcccctgtggcactgtccagtgggcctgatggttcgctctatgttggagacttcaacttc
atccgcagggtgcatccagatggatacaccagaaccattttggaactaaagaacagggac
accagacacagcaccagcccggcccataaatactacttagccatggacccgatgggagaa
gttctttatgtgtcggacaccagcagtcgcagagtgtacagggtgaggaaccttggtcag
ccgaaagatccatcacgaaacttggaggtggtagctgggactggggagcagtgtttgcct
tttgaccagacccactgtggagagggcaggaaggccaccgaagctgctctcaataaccct
cgaggtattgcagtagataaaaagggtgttgtctactttgttgatggcaccaccattcag
aagattaatgaaagggggttgctgtccaccatgattggctccaatggactgatgtcaacg
caacccctaagctgtgatgcacgtatggacattaaccaggtacgtctggagtggccaaca
gacttggctattaaccctctggacaactccctttacatcctggacaacaacattgtgtta
caggtatcagaaactcttcaggtgcgcattgtcgccggccggcccatccactgccaggtg
ccaggcattgaccaccatctaatgagccgagctgcggttcgggccactttggaagcagcc
aaagccatcgccatgtcacacttgggcaccctgtacatcgctgagactgatgagaggcgc
atcaatcgcattcagcaggtgtcaaccaatggagagatatctgttatctctggcgctcct
acggactgtgactgcaagatagaccccaactgtgactgcttctctggtgacggcggctac
gctcgtgacgctcgcctcaaagctccttcttctctggctgtgggccccaatggcacattg
tacattgctgatctagggaatattcggatccgagctgtcagccccaacaagcctcagcct
ggcccggctggaatagtcgagatcagctccccccttgaccaggagctctatctcttcagc
cagaatggctcacacctgtacactaagcacctgatcaccggccactacctgtacaacttt
tcttatggtagggatggcctgctatctacagtgacaggtcgtgatgctcatgcactccag
gtgaagagagatgctcacggtgtgccactctggctggcgctacctggtggacaagtgtac
cggttgtctcttagtaacagcggaacactgaggaagatttccgcacagggtcacgacatc
gcccacatcatttaccatggtaacaccggtctcctagcaaccaagagcgacgagaacagt
tggaccactgtatatgattacaacaacgaaggccgcgtgaccaacatcaccctcccgacg
ggtgatgtgcgcggtttccacggcaacctggatcgctggtcgagggttgaggtcgaagca
tccaaccgcgagaactttgtcaccagtacaaacctgtctgccagtgacactatctacaca
tttaaacgagaccatgcacagagttcttacaaagtcaacgccgacggctcgttctttgtg
tcgctggccagcgggatggagctgtcactgagcacagagcctttcctgcctggaggtgtt
gggggtggagtcagcccaatcgccagccgctgtaacatcagcctacctggtgaccacgcc
cccagtctcattgaatggaggcagaggaaggagcagagcaagactaactacagcacatat
gaacgcagactgaaggcacataaccggaacttgctgtccatagacttcgatcagagcaca
agagtggggaagatctatgatgaccacagaaagttcaccctacatatccaatatgatatt
ctcggccggcctgtggtctggtctcccagtagcaaatacactgaagttaatgtcagctac
tctggaggtggactcttgtcagccatccatcgtggagaatggtttgaacgtctgaagtac
gagaacgacaaggtggtgtccagagcctgggtcaatggaaagatatggagctacacatac
atagacaggtcggtcatgctacttctgcacagccaacggagatacgtctttgaatacgat
cagacagaccgactgatagcggtcacgatgcccagcatggccaaacacaacctgcactcc
ctgctgtccattggttactacaggaatatgtacactcctcctgacagcctggcatccttc
ctgcaagactacaccctggatgggaggctgctcaggactcagtacctggggacgggacgc
agtgtcatctaccggtatacgccagcagcgcgtctgtctgaggtgacatatgactcaacc
ctggtgaccttcacttacgatgaggcctcaggcagcgtcaaaaccatccatctcacccac
aacggctttataagctctatacgataccggcagacaggtccactgaccagccggcagatc
ttccgcttcagtgaagagggattggtcaacgcgaggtttgactacagttataataacttt
cgagtgaccagcatgcaggccgtcatcaatgagactcccctgccgattgatctgtaccgc
tacgttgacgtatcagggcgggtggagcagtttggcaaattcagtgtcatcttttatgac
cttaaccaggtgatcactacacatctgatgaagcacaccaaggtgtttaactcatacggc
caagtggtggaggtccaatacgagattctcaaatccatcgcctactggatgaccatccag
tatgactctgcgggacgtacaaccacctgtgacattagggtgggcgtggacagcaacgtg
acacgatacacttttgagtatgacgcagacagccaactgcaaagtgctgctgtcaatgag
cgacctcagtggcgctatagctatgacctgaacgggaacatcaacctgcttagtcatggc
accagtgcaaggttggttccgctgcgttatgaccagcgagaccgcatcactcatctcggt
gagatacagtacagtgtggatgaagacggattccttcgtcagagagccagcgacctgttt
gactacaactccaatgggctcctgatgcgggtcttcaaccgagcatccaaggactccgtg
tggtaccgatacgacggactgggccggcgtgtggccaccatgacgagccagggcgagcag
ctgcagttcttttatgcagacctttcacaccccaccagggttagccacttgtacaaccac
agcagcagcttgatcacgtcgctgtactacgacctgcagggtcacctcatcgccatggag
ttgagcagcggggaggagtactacgtcgcatgtgacagtgtggggacaccaagggccgtt
ttctcaagcaagggccgactggtcaaggagatcctctacaccccctacggagaagtctat
caggacactaaccctgactttcagctcatcatcggatttcacggaggcttgtatgatcct
ctcacacggctggtccacctgggaaggcgggattatgacactctagctggtcgctggact
tcacccaaccatgagctatggacggagctgagcaaagagccaagaccttttaacttgtac
gccttcaaaaataactgtcctgtggggagagtggaggaggtgacgcagtttacaacagac
attggcagctggctgcagctatttggcttccagcttcataacgttgttccaggtttccca
aagcccgagatcagccccatggaacaaacatacgaattgatgaagactcaaaccaagaca
caagactgggactcaagcaaggtggttttgggaatccagtgtgagctccggaggcagttg
agacgtttcatctctttggagcgtttacctctcgtctcagcaccagtcggctcaacctgc
caccgaccgacacgacctcctcccttcggctctcggccctttcttctcggccccagcatc
cgctttgccgtctcccatggtcgcgtgagcgccgaagtcatcggcgtggccagtgaggac
agtcggcgagtggctgccattttgaacggtgccgtccatctggacgggctgagcttcaca
gtgcacggctgtgacacccaccacttcctccagtcccgccctatcgaggaagacctagct
ttgggcttaggggtcggtgggcgcgttctagagagcggagtcaacgtgagcgtttcgcaa
atgagtgccactgtcaacggcaggactcgtcggtttgccgacatcactctccagcagggg
gcgctgtgcttgtgcatccggtatggtggcaatgaggaggaggagagagcgagggtgagg
gaagaggctaggcggagagcggtggagggggcatggtaccatgagaggaaacgggcggag
ttaggtgatgtaggcggacgaacgtggagcgacgtggagaaacagcagctgctatctgca
ggacgcgtgcagggttacgacggctactactccctgcctatagagcagcagccagagctg
tccgattgcccctacaacatccacttcatgactctcagcgaggtgggaggcaggtaa
DBGET
integrated database retrieval system