Syngnathus scovelli (Gulf pipefish): 125983475
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Entry
125983475 CDS
T08785
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20686
Rho guanine nucleotide exchange factor 9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983475
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125983475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
125983475
NCBI-ProteinID:
XP_049600656
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All DBs
Position
1:complement(17460638..17505462)
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AA seq
1263 aa
AA seq
DB search
MMEQLDNPAPESNNPNGFVNRVFNVSLDVENEISSVCIKETGSGPEEMQSEAQASSLQTP
VKDRQEVNRRPRATGGIWKILNRKRGVSDLEPRPHSMILLGEASIPKPSFADKVRSFKKL
KSPSVFRGKAGKLSSAKLSSSLVDEDSFCRDIGTPQQSSRGTFRHRGKRHSYAGYTGEFD
CSFEDIDLSAPTEDLQCTAVPETTVQNGCKPSERVSYSKRNHINSTNCNKAASCEEPCVK
PSKSTTQGAGRRHKDVWNYLRRISLLGKTNPVYSERSFDSELHTLDKTIDSDYGSVDLEN
VKDFQALPPKNPDMKGHFGGLFKFFNNVAETARKWRTPSRSFSPPEEAKTPINLPQVPQC
TVHKVHSVSLSLHDKGLPQCLNSASSPLTTKSSESIDREVPEPMTGSAKVVFKAFRTSAS
GSVNGLQGSKSTGNHIDTTTNYRPTIRENHLPHSVTSTETRAEHEMNPLNCLHLGETVQE
DTGNDEDSKDAPPDSQQIQEVKIQLQTNGKETMANSIPSSDSTEETFKLCEQIASQTGCS
VRLPGPALLHSNTEKTSVPQKPPHPRPRPASAVLDLWRPNPDRDLYNYYSEFGSLCRRRH
RPNPTMRHSLGLRRMPACPRPCSVIEATATSTMQSTELRNRALSRPPGVSPLEPPLKASL
QRCRSLPLPASTLTTLALLLPHSDVGPSSSSSVRLRSEGSSCRRKRLLRPGSEPLRVNIL
ISGGSIVNAEAVWDHVTMADRELAFKAGDVIKVLDASNKDWWWGQIDEEEGWFPASFVRV
EPHPPQPQTKQVFYINPIATPRFQNTTSKLWVNQEDGGGEPAEGTSEVQNGHLDPANDCL
CLGSPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLRQCRKRVDMFNDDQLKVIFGN
IEDIYRFQMGFVRDLEKQYNTEEPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKL
MRDGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQEHSDYRYVA
AALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGELSWIYQP
YGRSQQRVFFLFDHQLVLCKKDLIRRDILYYKGRIDMDRYEVRDAIDGRDDDFNVSVKNA
FKLCNKDCDEIHIFLAKKPEEKIRWLRAFHEERKMVQEDEKIGFEISEYQKRQAAMTVRK
VTKQKGVNRCTPPSYPPPQEPLSAGQYEVTEDMAQGEVFEFSQSKRGQAPFWQNFSRLAP
FKK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaactagacaatcctgcccctgagagtaacaaccctaatgggtttgtgaac
cgtgtgtttaatgtttctctggatgttgagaatgagatcagcagtgtttgtattaaagag
actgggtcagggccagaagagatgcagagtgaggcccaggcctcatctcttcagacccct
gtcaaggacagacaggaggtcaatcggagaccccgtgccactggaggcatctggaagatc
ttgaaccgaaaacgaggtgtctcagacctggagccgagacctcactccatgatcctactt
ggggaagcttctatccctaaaccctcatttgctgataaagttcgctcctttaaaaaactc
aaatccccttcggtgttcagaggaaaggctgggaaattgtctagcgccaagcttagcagc
tcattggtggatgaggactctttctgcagagacattggcactccgcagcaatccagcagg
ggcacatttagacaccgtggcaagaggcattcatacgctggctacacaggagagtttgac
tgttcttttgaagacatcgacctctctgctccgacggaagaccttcagtgtacggcggtg
ccagaaactacagttcagaacggttgtaaaccatcggaacgggtttcctactcaaaaaga
aaccacattaattcaacaaactgtaacaaagctgcaagctgtgaggagccttgtgttaaa
cctagcaaaagtaccacccaaggtgcagggaggcgacacaaggatgtgtggaattacctg
aggaggatctctcttttgggaaagacaaatcctgtctattcagagaggagctttgattct
gagcttcacactcttgacaagactattgactctgactatggttctgtagaccttgagaat
gtcaaagacttccaagcactgcctcccaaaaatccagacatgaagggacattttggtgga
ctgtttaaatttttcaataatgtagcagaaacagccagaaagtggcggacgccatcccgt
tctttctcccctcctgaggaagccaagacaccaattaacttgcctcaagttcctcagtgc
acagtacacaaagtccatagcgtgtccctatctctccacgacaaaggacttccgcagtgt
ctgaattctgcatcctcaccattgaccactaaatcctcagaatccattgaccgtgaggtc
ccagaacccatgacaggttctgctaaagttgtcttcaaagcttttcggacatcagcttct
ggaagtgtgaatggccttcaaggctcgaagagtacaggcaatcatatagacacgacaaca
aactacaggcccaccattcgagagaatcatcttcctcactcggttacaagcacggagact
cgtgctgagcatgaaatgaatccattaaattgtctgcacctaggagaaactgtacaagaa
gacacaggaaatgatgaggattccaaggatgctccacctgactcgcagcagatacaggaa
gtgaagattcaattacaaacaaatggtaaagagaccatggccaatagcataccatcatca
gattctacagaggagacttttaagctgtgtgagcagattgcaagccagacaggctgcagt
gtaagactgccaggcccagccttgctccactctaacacagagaagacctctgtacctcag
aagccgccgcaccctcgtcctcgcccggcatcagctgtattggatctgtggagacctaac
ccagaccgagatctctacaactattatagtgagtttggctcactatgccgacggaggcac
cgacctaatcccaccatgcgacactcactgggccttagaaggatgcccgcttgtcccagg
ccctgctctgtcattgaagccactgctactagcacgatgcagtccacggagttgcgcaac
agagccttgtctcgccccccgggggtgtctccgttagaaccgcccctgaaggcttctctg
caacggtgccgctccctacctctgcccgccagtactttaactaccttggctcttctcctg
cctcactcagatgtgggtccgtcatcatcatcatccgtacgtttgcgctctgaaggtagc
agctgcaggaggaagaggctgctacgacctgggtcagaaccactgcgggtcaacattttg
ataagtggagggtcaatcgtcaacgctgaggcggtatgggaccatgtgaccatggcagac
cgggagttggcatttaaggccggtgacgtcataaaggtgctggatgcctccaacaaggac
tggtggtggggccagattgatgaggaggagggatggttccctgccagctttgtgcgggtg
gaaccccaccctcctcagccccaaacaaaacaggttttctatatcaaccccatagcaact
ccacggttccaaaacaccacgtcaaagttgtgggtgaatcaagaggatggaggaggggaa
ccagccgaaggcacgagcgaggttcaaaatggtcacctggacccagccaacgattgtttg
tgtctgggctcgcctctccagaaccgtgaccaaatgagagctaacgtcatcaacgagatc
atgagcacggagagacactacatcaaacacctcaaggacatttgtgagggttacctccgc
cagtgcaggaaacgggtggacatgtttaatgatgaccaactgaaggtcatcttcggcaac
attgaggacatctaccgtttccagatgggatttgttagagacttggagaaacaatataac
acagaggagccccacctgtctgaaattggaccatgctttttagagcatcaagatggtttc
tggatatattcagaatactgcaataaccacttggatgcttgcatggagctgagcaagttg
atgagggatggcaggtaccagcacttttttgaggcctgtcgactcctccagcaaatgatt
gacattgccatagacggcttcttgctcacccctgttcagaagatctgcaaatatcccctc
cagttggccgaacttctcaaatacacggcacaagagcacagcgactatcgatatgtggca
gcagctttggcggtaatgcgaaacgtcacccagcagatcaatgagaggaagaggagactg
gaaaacattgacaaaattgcccagtggcaagcgtctgttttagactgggagggggatgat
atcttggacagaagctctgagctcatctacactggggagctgtcatggatctatcagcca
tatgggcgcagccagcagcgagtcttcttcctctttgatcaccagctggttctctgtaag
aaggatctgatacgacgggacattctgtactataagggtcgtatcgacatggatcgctac
gaggtgcgggacgccattgacgggagagatgatgacttcaacgtaagtgtgaagaacgcc
ttcaaattgtgcaacaaagactgcgacgagatccacatcttcctggccaagaagccggag
gagaagatccgctggctcagggctttccatgaggagaggaagatggtgcaggaggatgag
aaaatcggttttgagatctcagagtaccagaaacggcaggcggccatgacagtgagaaag
gtgaccaaacagaaaggtgtaaacaggtgcacgccgccctcatatccacccccgcaggaa
cccctcagcgcggggcagtatgaggtaacggaggacatggcacaaggagaggtttttgaa
ttcagtcaatccaaaagaggccaggctcctttctggcaaaattttagtagattagctcca
tttaagaaatag
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