Syngnathus scovelli (Gulf pipefish): 125983661
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Entry
125983661 CDS
T08785
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125983661 (ubtf)
03021 Transcription machinery [BR:
sscv03021
]
125983661 (ubtf)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
125983661 (ubtf)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
125983661 (ubtf)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
GCS2
Ccdc124
Rv0078B
Motif
Other DBs
NCBI-GeneID:
125983661
NCBI-ProteinID:
XP_049601077
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All DBs
Position
16:637531..645406
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AA seq
753 aa
AA seq
DB search
MNGNMEATSQHQVWAQDDVLQLLESMKLALPQKDLTKYKTSESHLDWQKVAFNSYTADMC
KLKWLEVAKEIRKFRTLTELILDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYLDDFVKDKEVFVHSMMRFREEHPELME
SMTKKGSNVPEKAKTPQQLWYTHEKKAFLKGHPDATTKDIKDYLSKQWTQLSDKKRLKWI
AKSLEQHKLYEETMREYIQQHPEMNLTQGDIVKSTLTKAERHLKDKSDGRPDKPPPNGYS
MFCAELMSSMKDVPSTERMVMCSQRWKLLKQNEKDAYQKRCEQRKKEYEIEMNRFLSSLS
EEEQQRVLGEDKVGFKRGTGANSAASRKNSKAKANAEKPKRPISAMFIFSEEKRPKLHQE
RPDLSESELTRMLARMWNELPDKKKEKYKRLEAVLKAGSEKKEDRSLPDPPKTAQDIWQQ
SVIGDYLARFKNDRPKAQKAMEATWSTMEKKEKIMWIKKAAEDQKRYEVSQRHDDLGPAA
AKRHSACRPQRDLCEMRSPVATAVASGKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHL
PMKERMTEIGSRWQRLPLKDKDRYKKIAEEMQRQYKVLLEQWLASVSSQVRNSYKEYNSQ
KRKTPTKPGGPKAKVKKSDTEEEDDDDDDDDDDEKDRASSEAGSSSEDDDDDDDDDDKDD
DDEDDDEVDDKENKSEDSSSESNSGGSSDSDSD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaacatggaggcaacatcccaacatcaagtgtgggcccaggacgacgtgctc
caattgctggagtccatgaagttggcactgccgcagaaggacctgaccaagtacaagacg
tcagagtcccacctggactggcagaaagtggccttcaactcctacacggccgacatgtgc
aagctgaagtggctggaggtcgccaaagagatccgtaaatttcggaccctcacggagctg
atattggacgctcaggactacatcaagaacccgtacaaaggcaagaaactaaagaaacat
ccggattttcccaagaagcccctgacaccgtacttccgcttcttcatggagaagagggcc
aagtatgcaaaattgcatccggaaatgagcaacttggatctgaccaagatcttgtccaag
aaatatcgtgagctgcctgacaaaaaaaagaaaaaatacttggatgactttgtgaaggac
aaagaggtttttgtccacagcatgatgaggttcagggaggagcacccggagctgatggag
agcatgactaagaaaggctcaaatgttcccgagaaggccaaaacgcctcagcagctgtgg
tacacccacgaaaagaaggccttcctcaaaggccaccctgacgctaccacaaaggatatc
aaggactacctcagcaagcagtggacacagctgtcggacaagaaaagactcaagtggatc
gccaagtcgctggagcagcataagctgtacgaggagaccatgcgcgagtacattcagcag
catcctgagatgaacctgacgcagggggacatcgtcaagtccactctgaccaaagccgag
aggcacctgaaggacaagtccgacggccgtcccgacaaacctccaccgaacggttactcc
atgttctgcgccgagctgatgtccagcatgaaggacgtgcccagcactgagcgtatggtc
atgtgcagccagcgctggaagctgctcaagcagaatgagaaggatgcctaccagaagcgc
tgtgagcagaggaagaaggaatacgaaattgagatgaacagattcctcagcagtttgtct
gaggaggagcagcagagggtgttgggtgaggacaaggtgggcttcaagcggggcaccggg
gccaacagcgcagcgtccagaaagaactccaaagccaaggccaacgcggagaaacccaag
cggcccatctcagccatgttcatcttctccgaggagaagcgtcccaagctgcaccaggaa
cgtccggatctctccgaaagcgaactcacgcggatgctggcgcgcatgtggaacgagctg
ccggataagaaaaaggagaagtataagcgactggaggcggtcttgaaggcggggtcggag
aaaaaggaggaccgtagtctgcccgacccacccaagacggcgcaggacatctggcagcaa
agcgtcatcggagactatctggccagatttaagaacgaccggcccaaggctcagaaggcg
atggaggccacctggagtactatggaaaagaaagaaaagatcatgtggatcaagaaggcg
gcagaagaccagaaaagatacgaggtgagccagcgccacgacgacctcggcccggcggca
gctaagcgccattctgcctgtcgtccgcagcgagacctgtgcgagatgcgttcgcccgtc
gccaccgctgtggcatctgggaagaagatgaagttcgagggcgaacccaagaagccgccg
tcaaacggctaccagaagttctctcaggagatgctgtccaacggagagctcaaccacctg
cccatgaaggagaggatgacagagattggtagccgctggcagaggctgcccctcaaggac
aaggaccgctacaaaaagattgcagaggagatgcagaggcagtacaaagtgctgcttgag
cagtggctggccagtgtatcttctcaagttaggaattcctacaaagagtacaactcgcag
aaaagaaaaacccctacaaaaccaggaggccccaaggcaaaggtcaagaaatcggacaca
gaggaagaagacgacgatgacgacgacgacgacgatgatgaaaaggacagggcttcctcc
gaagcgggctcctccagtgaagatgatgacgacgacgatgacgacgatgacaaggacgat
gatgacgaagacgacgacgaagtggacgacaaggagaacaagtcagaagacagtagcagc
gagtccaactctggcggctcgtcagactcggactcagactga
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