Syngnathus scovelli (Gulf pipefish): 125983665
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Entry
125983665 CDS
T08785
Symbol
ngfra
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16 isoform X1
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sscv04010
MAPK signaling pathway
sscv04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125983665 (ngfra)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125983665 (ngfra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125983665 (ngfra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sscv04050
]
125983665 (ngfra)
04090 CD molecules [BR:
sscv04090
]
125983665 (ngfra)
Cytokine receptors [BR:
sscv04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125983665 (ngfra)
CD molecules [BR:
sscv04090
]
Proteins
125983665 (ngfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
K_channel_TID
ADP_PFK_GK
TPR_21
Motif
Other DBs
NCBI-GeneID:
125983665
NCBI-ProteinID:
XP_049601093
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All DBs
Position
16:complement(604037..622275)
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AA seq
414 aa
AA seq
DB search
MTSLPPCSAPAREGEKPKAREEGGRKSERERERRGGDSLHLFLCIALASEPHSGQDAAPP
PPPPPPPSPLDAAVKREKKTKKSIWDENENIAPLVLPLCIFPDKQNESLSRACDHVRPGE
TFSENYSHTEECQACTQCTGLMRMETPCTDSNDAICMCRYNFYFEQLSGRCEPCTVCPAG
QGVYAHCEHDHDTVCEECEDFTFSDRDSPLDPCLPCTICDDETEIQLAHCTPVSDSVCHN
PLLPTYFPSVSTETESTSPAFTNDFLPDGSEGPAPGGETTTPGAGSPPRFLGHGFNENLI
PIYCSVLAAVVVGLVAYIAFKRWNSCKQNKQAANNRAAAAAAAAAAEAATNNQTVTPEGE
KLHSDSGISVDTQSLQEQQQQAQADVQPQRSRTQEHIVVRVDGVAEPVTPPPEV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctccctccctgtagtgcacctgcaagggagggtgagaagccaaaagcgagg
gaggagggaggaagaaagagtgagcgagagagagagagaagggggggggactcacttcac
ctcttcctctgcattgcacttgcatcggagcctcactccggacaggacgccgctcctcct
cctcctcctcctcctcctccttcgcctcttgatgctgcagtgaagagagaaaagaagacg
aagaagtcaatttgggacgaaaatgagaacatagctcctcttgttcttcctctttgcatt
tttccggacaaacagaatgagtccctttcccgtgcttgtgatcatgtacgccctggcgag
accttctccgagaactacagccacacggaggaatgccaggcgtgcacccagtgcacgggc
ctgatgcgcatggagaccccgtgcaccgactccaacgacgccatctgcatgtgccgctac
aacttctactttgagcaattgtcgggacgctgcgagccgtgcacggtgtgcccggccggc
cagggcgtctacgcccactgcgagcacgaccacgacaccgtgtgcgaggagtgcgaggac
tttaccttctcggaccgcgacagcccgctggacccctgcctgccttgcaccatctgcgac
gacgagaccgagatccagctggcgcactgcacgcccgtcagcgactcggtctgccacaat
ccccttctgcccacctacttcccatccgtctccaccgagacagagtcgacgtcacccgcc
ttcaccaacgacttcctccccgacggttccgagggcccggcgccgggcggcgagaccacc
acgccgggcgccggctcgccgccgcgcttcctgggccacggcttcaacgagaacctcatc
cccatctactgctccgtcctggctgccgtggtggtgggcctggtggcctacatcgccttt
aaaaggtggaacagctgcaagcagaacaaacaggcggctaacaatcgcgcggcggcggcg
gcggcggcggcggcggcggaagctgccacaaacaaccagacggtgacgccggagggagag
aagctgcacagcgacagcggaatctccgtggacactcagagtctccaggaacagcagcaa
caggcgcaggccgacgtacagcctcagcgctcacgtacacaggagcacatagtggtgagg
gtggacggcgtagcagagccggtcacgcctcctcccgaagtctga
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