Syngnathus scovelli (Gulf pipefish): 125983679
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Entry
125983679 CDS
T08785
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sscv00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sscv01100
Metabolic pathways
Module
sscv_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125983679 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125983679 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125983679 (xylt2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
125983679 (xylt2)
Glycosyltransferases [BR:
sscv01003
]
O-Glycan biosynthesis
Glycosaminoglycan
125983679 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
125983679
NCBI-ProteinID:
XP_049601109
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Position
16:complement(3600994..3607985)
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AA seq
872 aa
AA seq
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MAASARVQKLLRRYKLAIAAALTILLIQSLVVWSLKSLEEGEAEKKARRSKLPDNNSQDQ
RRDATVLERHIALSGSNKGRLERTGGTTTGALRKGAGQKQGKPGVRLKNPLEQGQTGTEL
DGVAPHDPSSNLSEMRGAADVVAKLTGALPGEPGSVDGARQSPSSDFEPKCDIISKDAWS
ALHRASSQQCRQEIANLVCMHQAGQLMPDDLPQFCPQPGILSAAQSVGEPDNSLANVENP
VRVVFVLMVHGRSVRQLKRLIKAIYHSDHYYYIHVDKRSGYMHREVLQIAQQYPNIRATP
WRMVTIWGGASLLKAYLRSMQDLLALLDWKWDFFINLSGTDFPTRTNDELVAFLSQHRDK
NFLKSHGRENTRFIKKQGLDRLFLECDNHMWRLGERKIPDGLEVTGGSDWFALTRRFVEY
VINSQDDLVSGLKQFYSYTLLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCKCQY
KHIVDWCGCSPNDFKPQDLIRIQQLSRPTFFARKFESSINQEAIEILDTHLYGQYAPGTV
AVKAYWENQFEQMDGIGSLSDVMLTAHASLFRLGLKSLATPQGKKDACRFEPIGYPLSVH
LYFYDDRFQGYLICQEVQAVGSKVKESIEMWAVPQTALVLEKNLKEFERLKHLEISTEWD
PKERVFRNFGGIIGPLDEPLAVQKWAPGPNLTATVVWIDPAQVVAISYDITVDADTEYTY
YKPSLQHPLRPGIWTVRVLKQWQRVAQLHFLIVPLSFNDKKPLSKDKDSWLHAGPPGNLY
VDQSFQHLSSILKLPPQEPAMLEAQRNAQSVGPPLDVWVDWSVSNFWVTGNLCTAQTSSC
TALVPCSKTTWSSLSPDPKSELGPVKSDGRIR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagcgcaagggtgcagaagctcctccggcgatataaactagctatcgccgct
gccttaaccatccttctcatccaaagcctcgtcgtgtggagcctgaaaagtctggaagag
ggcgaggcggagaaaaaagcaagacgatctaaactgcccgacaacaacagccaggatcag
aggagggatgccacggttttagaaagacacattgcgttgtctggaagtaataaaggcagg
ctggaaagaaccggaggcacgacaaccggcgcacttagaaaaggggccggtcaaaaacaa
ggaaagccgggagtcaggctgaagaatcccctcgagcaggggcaaaccggcaccgaattg
gacggtgtagcaccccacgacccatccagtaacctcagtgagatgcgaggcgccgctgat
gtggtggccaagttaaccggcgccttgccaggggagccaggcagcgtggacggggcacgc
caatcccccagcagtgattttgagcccaaatgtgacatcataagtaaggatgcgtggtct
gctctgcatcgtgctagctcacagcagtgtcgccaggagatcgccaaccttgtgtgcatg
catcaagccgggcagctcatgccggatgaccttccgcaattctgccctcagccaggcata
ttgagtgccgctcagtcagttggcgagccggacaacagcctggccaacgtggagaaccct
gtccgtgtggttttcgtcctgatggtccacggccgctctgtacggcagctcaagcgtctc
attaaagccatctaccactctgatcactactactacatccatgtagacaagcggtcgggc
tacatgcaccgggaagtcctccaaatagcccagcagtacccaaatatacgtgccacgccc
tggagaatggtgaccatctggggcggtgccagtctgctgaaggcgtacctgcgcagcatg
caggacctcctggccctgctggattggaagtgggatttcttcatcaatctcagtggcaca
gacttccccaccaggactaatgatgagctagtggcctttttatcacaacaccgagacaag
aacttcctcaagtcccatggcagagagaacacccggtttattaaaaagcagggcctcgat
cgtctctttctcgagtgtgacaaccacatgtggcgcttgggagagcgcaaaattcccgat
ggcctggaagtgacgggtggctccgattggtttgcgctcacccgccgctttgtggagtat
gtcatcaattcccaagacgacctggtttcgggactgaagcagttctattcctatactttg
ctccctgctgagtctttcttccacactgtgctcggaaacagtcacatgtgcgacagcctg
gtggacaacaacctccgcgtgaccaactggaatcgtaaactgggctgtaaatgccaatac
aagcacattgtggattggtgcggttgctctcccaatgacttcaaaccccaagacctcatt
cgcatccagcaattatcccggcccacattctttgcacgcaagtttgagtcgtcaataaac
caggaagccattgaaatcctggacacgcacctgtacggccagtacgcaccaggaactgtt
gccgttaaggcgtactgggagaaccagtttgagcagatggatggcataggctcgctgagt
gatgtgatgctcactgctcatgcttccttgtttcgcctgggcttgaaaagccttgcgaca
cctcagggcaaaaaagacgcctgcaggtttgaacctatcggctaccctttgtcagtgcac
ttgtacttctacgatgaccgctttcaagggtacttgatatgtcaggaagttcaggctgtg
ggatcaaaggtcaaggagtcaatagagatgtgggctgtgccccagacggcattggtcctt
gagaagaatcttaaagagtttgaaaggctcaaacaccttgagatcagtacagaatgggat
ccaaaggaaagagtttttcgtaatttcggcgggatcatcggccctttggatgaaccactt
gcggttcagaaatgggctcccgggcccaacctcaccgccaccgtcgtgtggattgacccg
gcccaggtggtggcaatttcgtatgacatcacagtggatgcagatacagaatacacatat
tacaagccatccctgcagcaccccctacggcctggcatttggacggtgcgtgtattgaaa
cagtggcagcgtgtggcccaacttcatttccttatcgtacctttgagcttcaacgataag
aagccactgagcaaagataaggacagttggctgcatgcaggcccacctggaaatttgtac
gtggatcagagcttccagcacttgagttccatactgaagttgccacctcaagagcctgcc
atgctggaagcgcaacgaaacgcccagtccgtgggcccgccccttgacgtctgggttgac
tggagtgtgtcaaacttttgggttacaggaaacctgtgcactgcgcagacttcatcttgc
acagctttggtgccatgctccaaaactacctggagctccctgtccccggacccaaagtct
gaactgggcccggtgaaaagtgacgggagaatcaggtag
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