Syngnathus scovelli (Gulf pipefish): 125983789
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Entry
125983789 CDS
T08785
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
sscv04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125983789 (notch3)
04371 Apelin signaling pathway
125983789 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
EGF_3
Notch
NOD
NODP
Ank_3
Ank_4
Ank_5
EGF_Teneurin
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
125983789
NCBI-ProteinID:
XP_049601334
LinkDB
All DBs
Position
16:complement(5147373..5170665)
Genome browser
AA seq
2447 aa
AA seq
DB search
MEGNIPWIILSFLLFMQLCEGFRCSDKSRPCENGGTCIESPSRCICRPGFIGPLCQHQDP
CHRSPCLNGAACKSQVVNGVPQYSCVCQRGFRGQDCSLIDACATSPCANGARCANWNNHY
NCSCPPGFQGKNCRSDVDECRKPGACLNAGLCINTHGSFRCQCPPGYSGRTCEVSTQPCA
PSQCLNGGTCRQTSDHSYECACLPGFQGHNCENNVDDCPGHKCMNGGICVDGVNTYNCQC
PPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCAIAV
CFNGATCHDRVASFFCECPVGKTGLLCHLEDACVSNPCNEGAVCDTNPLNGRAICTCPAG
FVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECVSMPCQN
DATCLDRIGEFTCICMPGYTGTYCETDVDDCESNPCVNDGICRDMVNGFTCTCQPGFTGT
MCQIDIDECASTPCQNGAKCYDRPNGFECRCAEGYEGTLCESNINNCQPDPCHHGTCVDG
IASYTCNCDAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCELNFD
DCASNPCDYGMCKDGINRYDCVCKPGFTGPKCNVEIDECASSPCRNGGTCVDEENGFHCQ
CPDGFKPPYCYSQVDECGSSPCVHGACRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPCQ
NAGTCIDQLNGFTCKCRQGFRGNLCQVNINECASSPCLNKGTCVDGVASFTCLCELPYSG
PTCAEVLTPCSPNPCSNQAVCTHTADYLGYQCNCQPGWQGQLCNRDVNECLSNPCKNRGT
CSNTLGSFVCSCRPGFTGPTCDTDINDCSPNPCLSGGSCTDSVNSFHCSCLPGFTGPRCA
LEINECQSLPCKNGGTCTDYVNSYTCTCRAGFTGIHCETNIRDCTESSCFNGGTCTDKIN
GYSCTCRSGFTGSHCQYEVNECDSQPCLNGGVCQDALESFRCTCPKGYAGSRCQTPVDWC
RRSSPCQNGGRCRQKDSAFLCECAHGWSGRYCDIPRVSCEMAARQRGLQTDELCHHGGHC
VNTGNTHYCKCPGDYTGSYCESQVDHCEDKPCRNGATCRGYVGGYQCDCMPGFTGQNCEL
EINECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPVRSRGAVHKCLNNG
TCVDRVGGYRCNCPPGFTGERCEGDINECLSNPCSPSNSLDCIQMPNDYQCVCKVGFTGR
RCQNRFSACESQPCQNGGACSGSSSAVGYTCTCQLGYTGPNCERSMSCRELSCYNGGSCA
LTTRGARCSCLPGYGGPQCAHRSNEGCSSQPCRNGGLCTEETAFPFFHCQCPSGWTGKRC
EQNEAPVLSCPLTDCHGKANDGVCDKECSTLACRWDGGDCSLAVNPWARCADPRCWRVFN
NSQCDESCNNADCLYDNFDCKTKEKVCNPIYETYCIDHYADGLCDQGCNTEECGWDGLDC
AQKVPEDIVDGSLVLVVLLPPEELLRTSTAFLLKLSAILHTTLRFRLDHNGEAMIRPYTR
REARLKRELQPQQEIIGSIVYLEIDNRLCTNDCFPTPESAADYLGALSAVEMLRFPYPLK
EVRGEKIVDETDPIPQWGKLMLVSIASLFLLIIVVLGMLISRRKREHSTLWFPEGFLPKK
EPGSNKNRREPVGQDALGMKHMPKTVEESLLGDHSDQWMDAECPEPKRLKMEEPSMLSDG
EDAVDSRQWTQHHLAAADIRVPPTMALTPPQGEFESDCMDVNVRGPDGFTPLMLASFCGG
GLEPEIAEEEESEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAAKRLLDA
GADANAQDNTGRSPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAARLAVEGM
VEELITCHADVNAVDELGKSALHWAAAVNNVDATIALLKNGANKDMQDLKEETPLFLAAR
EGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQGHGGPGL
HLSSGHTLSPLMCPPSAFLPSLKTTPQGKKNRRPGAKGSGLGGQHAGGLKDSVKARNKKL
SLDMQSALLESSVTLSPVDSLDSPHGGASNAGYITNPTSPVAMPSPGLFHSSMSVPNTPM
VHAGMLDGGGPFAVSLAQLNDLGNGGMTMQGRVSMASDVGHGYVLSPSGQMGLNMGLVSP
VSVPFDWHARASASQCGQQVVNLVQSMPPPQQSMQPPPPMQQNMLLHQQQMYRSAMLQPT
PVTSTPSVSPVKLPSISEQQIMSHSVSSQQSMARMASSTPPTPQTSQPPPPFFQQPPPQA
PPGVAPPAQAPVPQPGSTEDYPTPPSQHSYTSALDATPKHYLHLPTEHPYLTPSPESPEP
WSSPSPQCVSDWSDSTPSPAVAVAAAGSAQTQISNIPEANKKMQVFA
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaatataccgtggattattttgtcttttttattgtttatgcaactttgtgaa
ggttttcgatgctctgataaatccaggccatgtgaaaatggagggacatgcatagagtcg
ccctcccgatgcatatgccgtccaggattcatcggtcccctttgtcagcaccaggatccc
tgccaccgatcgccgtgtcttaacggggccgcttgcaagagccaagtggtcaacggtgtc
ccgcagtacagctgcgtgtgccagaggggcttcagaggccaagactgctcgctcattgac
gcctgcgccacgagtccttgtgccaatggcgcccgttgtgccaactggaataatcactac
aactgctcctgcccacctggcttccaagggaaaaactgccgcagcgacgtggacgagtgc
cgcaagcccggcgcttgcctcaacgccggcctttgcatcaacacccacgggtccttccgc
tgccagtgcccgcccgggtacagcgggcgcacgtgcgaggtgtccacccagccctgcgcc
ccctcgcagtgcctcaacggcggcacatgtcgccagaccagcgaccattcctatgaatgc
gcctgcctgccaggcttccagggccacaactgtgagaataatgtggacgactgcccgggt
cacaagtgtatgaatggcgggatttgcgtggatggagtcaacacatataattgccagtgc
ccacctgaatggacaggccagtactgcgccgaggacgtcaacgagtgtctgatgcagccc
aacgcctgccacaatgggggcacgtgcttcaacaccatcgggggccacacctgcgtctgc
gtcaacggctggacgggcgacgactgcagcgagaacatcgacgactgcgccatcgccgtt
tgcttcaacggggccacctgccacgaccgagtcgcctccttcttctgcgagtgcccggtc
ggaaagacgggtttgctgtgccacttggaggacgcgtgtgtgagcaacccctgcaacgag
ggagccgtgtgcgacaccaaccccctcaacggccgcgccatttgcacctgccctgctggc
tttgtgggaggggcttgtaaccaggacatggacgaatgctccatcggtgcaaacccatgc
gagcactttggcaagtgcgtcaacactgagggctcgttccaatgtcaatgcggccgcggc
tacgccggcccgcgttgcgagatcgacatcaacgaatgcgtgtcaatgccttgtcagaac
gacgccacttgcctggaccgcatcggagaattcacctgcatctgcatgccaggttacacg
gggacttactgtgagaccgacgtcgacgactgcgagagcaacccgtgtgtgaatgatggt
atctgtcgggacatggtcaatggcttcacgtgcacctgccaacctggcttcaccggcacc
atgtgccagattgacatcgacgagtgtgccagcacgccctgccagaacggcgccaagtgc
tacgaccgacccaacggcttcgagtgccgctgtgctgaaggatacgaaggtacgctatgt
gaaagcaacatcaacaactgccagcccgacccgtgccaccacggcacctgcgtggacggc
atcgctagctacacgtgcaactgcgacgccggctacacagggtaccgctgcgagaaccag
ctcaacgagtgccacagtaacccttgccagaacggagggaagtgcgtcgacctggtcaac
aaatacatctgccagtgccaacatgggacgtcgggcaccaactgcgagcttaatttcgac
gattgtgccagtaacccgtgcgactatggcatgtgcaaagatggcatcaaccgctacgac
tgcgtttgcaagcccggcttcaccggtcccaagtgtaacgtggagatagacgagtgtgcg
tcgagcccctgtcgcaacggaggcacgtgcgtggacgaggagaacggcttccactgccag
tgcccggatggattcaagcccccgtactgttactcgcaggtggacgaatgcggcagcagc
ccgtgcgtccacggcgcctgcagggacgacatcaacggttatcgctgtgattgcgagcca
ggctgggtgggaaaaaactgcgacctggaccggaatgactgtttgccgagcccttgccag
aacgccggcacttgcatcgatcaacttaacggcttcacctgcaaatgccgtcagggcttt
agaggtaacctctgccaggtgaacatcaacgagtgtgcgtccagtccctgcctgaacaaa
ggcacgtgtgtggacggcgtggccagcttcacctgtctgtgcgagcttccctacagcggc
cccacgtgtgccgaagtgctcaccccatgttccccgaacccctgctcaaatcaggccgtc
tgcacccacaccgcagactaccttggctaccagtgcaactgccagcccggttggcaaggg
caactttgtaacagagatgtgaacgaatgcctctccaatccttgcaagaaccgcgggacc
tgctccaacacactcgggtcttttgtgtgctcctgcaggcccggtttcaccgggcccacc
tgcgacacagacatcaacgactgctcccccaatccgtgcctaagtggaggctcctgcacg
gacagcgtcaactccttccactgcagctgcctgccgggcttcaccgggcctcgctgcgct
ctggagatcaacgaatgtcaaagtttgccctgcaagaatggcggcacatgcaccgactac
gtcaactcctacacgtgcacgtgcagggccggcttcaccggcatccactgcgaaaccaac
atacgcgattgcacggaaagctcgtgcttcaacggagggacgtgcacggataagatcaac
ggctactcgtgtacgtgccgctcgggcttcaccggctcgcactgccagtacgaggtcaac
gagtgcgactcgcagccgtgcctcaacgggggtgtctgtcaagacgccctggagtccttc
cgctgcacctgccccaaaggctacgccggctcgcgctgtcagacaccagttgactggtgc
agacgttcctccccctgccagaacggaggacgctgtcgtcaaaaagactcggccttcctc
tgcgagtgcgctcacggctggtccggacgttactgcgacatcccccgagtctcctgtgag
atggcggctcgccaaagaggactccagacggacgagctgtgtcaccatggcggccactgc
gtcaacacgggcaacacgcactactgcaaatgtcccggcgactacacgggcagctactgc
gagagccaagtggaccactgcgaggacaaaccctgtcgcaatggcgccacctgcagggga
tatgttggaggataccagtgtgattgcatgccgggcttcacgggtcagaactgcgagctg
gagatcaatgagtgtcaatctcacccttgccaaaacggcggcacgtgcatcgacctggtc
ggacattacatctgctcctgtcctcctggcactctgggcgtcctctgcgagatcaacgaa
gacgactgcgccccacctgtgaggtctcgcggcgcagtccacaagtgcctcaacaacggc
acctgcgtggaccgagtgggcggctaccgatgcaactgtccgcccgggttcaccggcgag
cggtgcgagggggacatcaacgagtgtctctcaaacccttgtagtccctccaacagcctg
gactgcatccagatgcccaacgactaccagtgtgtctgcaaagtcggcttcacaggtcga
aggtgccaaaaccgattcagtgcttgtgaatctcagccttgccaaaacggaggagcgtgc
tccgggtccagttctgctgttggctacacgtgcacgtgtcagctcggttacacaggcccc
aactgcgagcgaagcatgtcctgccgcgaactgtcttgctacaacggcggaagctgcgct
ctcaccacgcgaggggcacgctgcagctgcctgcctggctacggcgggccgcaatgcgcc
caccgcagcaacgaaggctgctcctcgcaaccctgccgcaacggcggcctttgcaccgag
gagaccgccttcccgttcttccactgccagtgtcccagcgggtggacgggcaaacggtgc
gagcagaacgaggccccggtcctgtcgtgcccgctgaccgactgtcacggcaaagccaac
gacggcgtgtgcgacaaagagtgcagcacgctggcttgccgctgggacggcggcgactgc
tcgctggcggtcaacccttgggcccgctgcgccgacccccgctgctggcgtgtcttcaat
aacagccagtgcgacgagtcgtgcaacaacgctgactgcttgtacgacaactttgactgc
aaaacgaaggagaaagtttgcaaccccatctacgagacgtactgtatcgaccactacgcc
gacggcctttgcgaccaaggctgcaacacggaggaatgcggctgggacggcctggattgc
gctcaaaaggtcccggaagatatcgtggacggctccttggttctagtggtgctgctgcct
ccggaggagcttctccgcaccagcacggcctttctgctcaagctgagcgccatccttcac
accacgctacgcttccggctggaccacaacggcgaggcgatgatccgaccctacacccgg
cgggaagcacgccttaaacgggagctgcaacctcagcaggagattatcggctccatcgtt
tacctggagatagacaaccgcttgtgtactaacgactgcttcccaacgcccgagagcgcc
gccgactacctcggagccttgtcggccgtcgaaatgctccgcttcccgtacccgctcaaa
gaagtccgcggtgaaaagattgtggatgaaacggaccccattcctcaatggggcaagctg
atgctggtcagcatagcgtcgcttttcttgctgatcatcgtggtgttaggcatgttgatt
tcccggaggaagcgcgagcacagcacgctgtggttccccgagggcttcttacccaagaag
gagcccggcagcaacaagaaccgcagggagccggtgggccaggatgctctcggaatgaaa
catatgcccaaaacggttgaggagtctctgcttggagatcacagcgaccagtggatggac
gccgaatgcccagaacccaaacgactgaagatggaggagccaagtatgctgtcagatgga
gaggacgccgttgatagccggcagtggacgcaacatcacctggcggcggcggacatccgc
gtaccgcccactatggcgctcacgcctccgcaaggagagtttgaaagcgactgcatggat
gtgaacgtcagaggtccagatggttttactccacttatgctggcgtcgttctgcggaggc
gggctggaacccgagattgccgaggaggaggagagcgaggagtgctcggccaacatcatc
tcagacctcatctatcagggcgcgtcgctcgccgctcagacggatcgcacgggcgagacg
gcgctccacctggctgcccgttacgcccgcgccgacgccgccaaaagactcctggatgct
ggagcagacgccaacgctcaggataataccggacgctcgcccctgcatgccgccgtggct
gcggatgcacaaggagtgttccagatcctgatccgaaacagggccacagatcttgactcg
cgcatgtacgacggctccacggcgctcatcctggccgctcggctggcggtggaaggaatg
gttgaggaactcatcacttgccacgcagatgtcaatgcagttgatgaactaggtaaatct
gccttgcactgggcggctgctgttaacaacgtggacgcaacgattgccttgctcaagaat
ggcgccaacaaagacatgcaagatcttaaggaggagacgcctctgttccttgcggctcga
gagggaagctgcgaggccgtcaaagttctgctggctcactttgccaaccgcgagattacg
gaccacatggacaggctgccccgagacattgcacaggagcgcatgcaccatgatattgtg
cagctcctggatgagtacaacactgtgaggagcccccagggccacggcgggcccggactc
cacctctccagtgggcacaccctgtcacccctcatgtgcccgcccagcgcgttccttccc
agcctgaagaccaccccgcagggcaagaagaaccgccggccgggggctaagggctccggc
ctgggaggtcagcacgccggcggtctgaaggactcggtcaaggcccgcaacaagaagctg
tccttggacatgcagagtgccctgctggagagctcggtcaccctctccccagtggactcg
ctggactcgcctcacgggggtgccagcaacgccggctacatcaccaaccccacgtccccc
gtggccatgccgtcgccggggctcttccactcgtccatgtctgttccgaacacgcccatg
gtgcacgccggcatgctggacggcggcggcccctttgccgtgtctctggcgcagctcaac
gacctgggcaacggcggcatgaccatgcagggccgcgtgtccatggcgtcggacgtgggc
cacggctacgtgctgagtccgtcgggccagatggggctcaacatgggcctggtgagcccg
gtcagcgtgcccttcgattggcacgcccgggcgtccgcctcgcagtgcggccagcaggtg
gtgaacctggtgcagagcatgccgccgccgcagcagagcatgcagccgccgcccccgatg
cagcagaatatgctgttgcaccagcagcagatgtaccgcagcgccatgttgcaacctacg
cccgtcacctccacgccgagcgtcagccccgtcaaactgccctccattagcgagcagcag
attatgagccactcggtaagcagccagcagagtatggcccgcatggcgtcgtccacgccg
cctacgccgcagacctcgcaacccccgccgcctttcttccagcagccgcctccgcaggct
ccgccgggcgtcgccccgcctgcccaagctcccgtcccccagccgggctccacggaagat
taccccaccccgccctcgcagcatagctacacgtcagcgctcgacgccacgcccaagcat
tacctgcacctgcccaccgagcacccctacctgaccccttcgcccgagtcccccgagccc
tggtccagcccctcccctcagtgcgtgtccgactggtcagactccacgcccagccctgcc
gtcgccgttgccgccgccggctccgcccagacccaaatttcaaatatcccagaagccaac
aaaaagatgcaggtgtttgcttaa
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