Syngnathus scovelli (Gulf pipefish): 125983834
Help
Entry
125983834 CDS
T08785
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125983834 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125983834 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125983834 (slc27a1a)
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125983834 (slc27a1a)
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
125983834 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125983834
NCBI-ProteinID:
XP_049601435
LinkDB
All DBs
Position
16:6103950..6109406
Genome browser
AA seq
648 aa
AA seq
DB search
MHNAASVSASLGSIGLLRLFGLSWTWSLLAGLGVYLGTSRWKYFYVAARTAKRDVTGLCV
LLRVKMALWRYMRDGSNVLTMFAETVKRNPNKIALIYEATGESWTFTQLDQLSNSVAHWA
RNQGWVTGDIVALFMESRPLQVALWLGLAKVGVEAALINFNLRKDSLLHCIGVSRSRAIV
FGTELADAISEISTSLSQSMVRFCTGDLSTHHEAYLGATHLDPILASTPRHSPLPCVKHK
GMNDCLFYIYTSGTTGLPKAAIVVHSRYYRIVAFGYYAFRMRQDDIIYDCLPLYHSAGNI
MGVGQCLLNGLTVVVKKKFSASRFWDDCIKYNCTVVQYIGEICRYLLSQPVRPSEKAHKV
RLAVGNGLRPSVWEAFTERFGVTQIGEFYGATECNCSIANLDGKVGACGFNSRILPNIYP
IRLVKVDENTMELVRDSRGLCVPCQPGEPGLLVGRINQQDPLRRFDGYVNHEATSKKIAQ
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTIEVEGILSSLLDQTDVA
VYGVIVPGVEGKAGMAAIADGNGTFDLDAFLQKVQAALPPYARPVFLRLSPSVDTTGTFK
IQKTRLQREGYDPRLTSDRLYFLNVKAGRYVPVDDELFIAIMEARVHL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcagcgagtgtgtcagcctctctgggctccattgggctgctgcgtcttttc
ggactgtcctggacctggagtctgctggcgggactcggggtgtacctgggcaccagtcgc
tggaagtatttctatgtggcagcacggaccgccaaaagagatgtcacaggtctgtgcgta
ttactaagagtcaagatggcgttgtggcgctacatgcgtgacggaagcaacgtcctcacc
atgttcgccgagacggtgaaacgcaaccctaacaagattgcgctcatctacgaggccacg
ggggaatcgtggaccttcacccagctggaccaactgtccaactcggtggctcactgggcc
agaaatcagggttgggtcactggagacatcgtggctctctttatggagagtcgaccgttg
caggtggccctctggttgggcttggccaaagtcggcgtggaagctgctctcatcaacttc
aaccttcgcaaggactcactcctgcactgcattggagtgtctcgatctcgggctattgtg
tttggaaccgagcttgctgatgccatctccgagatcagcacctccctcagtcaatccatg
gtgaggttttgtaccggagacctcagcactcatcacgaggcctatctgggggcaacgcac
ttggatccaattttagcctctactccgaggcactcccctttgccttgtgttaagcataaa
ggcatgaatgactgtttattttacatctacacctctggcactacaggactacccaaggct
gctattgttgtgcacagtcggtactacagaattgttgctttcggctactacgcttttcgt
atgcgccaggatgacatcatctatgactgtcttccgctgtatcattctgcaggtaacatc
atgggcgtcggccagtgtctgctcaatggcctcactgtcgtcgtcaagaagaaattctcc
gcaagtcgtttctgggatgattgtatcaagtacaactgcaccgtggttcagtatatcggt
gaaatttgccgctacctcttgtctcagccggtgcgtccgtcggaaaaggcccacaaggtt
cgcttggcggttggaaacggtcttcgtccaagcgtttgggaagccttcaccgaacgtttc
ggcgtgacgcagatcggcgagttctacggagcgaccgaatgcaactgtagtatcgccaac
ttggacggcaaggtgggcgcctgtggattcaacagtcgcattctgcccaacatttacccc
atccgtctggtcaaagtggacgagaacaccatggagctagtccgggatagccggggtctt
tgcgtgccctgtcaacccggtgagccaggcctcctggttggccgcatcaatcaacaggat
ccgctgaggcgctttgacggctacgtgaaccacgaagccactagcaagaaaatagcccaa
aatgttttcaagaagaatgactcagcctacttgtcaggcgacgtcttggtgatggatgaa
ttaggctacatgtatttccgcgaccgcagcggcgacacgtttcgctggcggggagagaac
gtgtccaccatcgaagtagagggcatactgagcagcctcttggatcagaccgacgtggcc
gtttacggtgtgatagtgccaggtgtcgaagggaaggcaggcatggccgccattgcagac
ggcaacggcacgttcgacctcgacgcattcctgcagaaggtccaggcggctctcccgccg
tacgctcggccggtgttcctacgactctcgccgagcgtcgacaccacgggtaccttcaaa
atccaaaaaacaaggcttcagagggaaggctacgacccacgactcacaagcgaccggctc
tacttcttaaacgtgaaagccggccgctacgttcctgtagacgacgagctctttattgcc
ataatggaggcccgagtgcatttatga
DBGET
integrated database retrieval system
