Syngnathus scovelli (Gulf pipefish): 125983861
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Entry
125983861 CDS
T08785
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125983861 (elavl3)
03041 Spliceosome [BR:
sscv03041
]
125983861 (elavl3)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125983861 (elavl3)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125983861 (elavl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
125983861
NCBI-ProteinID:
XP_049601493
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All DBs
Position
16:complement(5421791..5444242)
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AA seq
456 aa
AA seq
DB search
MACPHVTVTRRRRAGGGTLVLLLPSCPVLCVFVVRRTKGKKNQRALPPPPSPRWEPGRDP
LFLLVVGRRASVKSSIISTMETQVSNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQN
MTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKT
IKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGV
GFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTG
PLHHQTQRFSVIPSLGKGPDPNNSSKPILDNLLNASYGVKSSPTLFPRFSPITIDSMTSL
AGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT
MTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKQHKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtccccatgtaacagtaactcgtcgaagacgagcaggggggggtactctcgta
cttttactcccgtcctgtccggtgttgtgtgtttttgtggtgaggaggacgaaagggaaa
aagaaccagagagcgcttcctcctcctccgagtccacgctgggaacctggccgggatccc
ttgttcctcctagtggtcgggaggcgagccagtgtcaagtcatccataatcagcaccatg
gaaacccaggtgtccaacggtccgagcggaaccagtctgcccaacggcccagtcatcagc
accaacggcgccacggacgacagtaaaaccaacctgattgtcaactacctgccccagaac
atgacgcaggaggaattcaagagcttgtttggtagcatcggcgagatcgagtcctgcaaa
cttgtcagggacaagataacaggtcagagtctggggtacggcttcgtcaactacgtggat
ccgaacgacgccgacaaggcgatcaacacacttaatggtctcaaactacagactaaaaca
atcaaggtatcatatgcacggccaagctctgcttctatccgtgacgcaaacctctacgtc
agtggtctccccaagaccatgagccagaaggacatggaacaactcttctcccaatacggt
cgcatcatcacatctcgcattttagtggaccaagttacagcaggcatatcacgaggagtg
ggcttcatccggtttgacaaacgaaacgaggcggaggaggccatcaagggtctgaacgga
cagaagcctctgggcgctgccgagcccatcaccgtcaagtttgccaacaaccccagccag
aagacaggccaggctttgctgactcagctgtatcagacggccgcccgacgctacacgggg
cccctgcaccaccagacgcagcgtttcagcgtgatcccttctctgggaaagggaccagat
ccaaataacagctcaaaaccaatactcgacaatttactaaacgccagctacggagtcaag
agttctcccactctcttccccagattctccccgatcaccatcgacagcatgaccagcctc
gccggcgtcaacctcaccggtcccaccggagccggctggtgtatcttcgtgtacaaccta
tcgcccgaggcggacgaaagtgtcctgtggcagctctttgggccgttcggcgcagtcacc
aacgtcaaggtcatccgtgactttaccaccaacaaatgtaagggcttcggttttgtaacc
atgaccaactacgacgaggcggccatggcgatcgcgagccttaacggctaccgcctgggc
gaccgcgtgctgcaggtttccttcaagaccagcaagcagcacaaggcttga
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