Syngnathus scovelli (Gulf pipefish): 125983867
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Entry
125983867 CDS
T08785
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125983867 (samd1a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
125983867 (samd1a)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125983867
NCBI-ProteinID:
XP_049601522
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All DBs
Position
16:5851452..5857217
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AA seq
430 aa
AA seq
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MSDAKYREWILDTIDSLRSRKARPDLERICRMVRRRHGCEPDQTCGELEKLIREQTVLKV
NYKGSISYRNAAKVQRRCRKKDDAVTASSAAAAVTATSVAAVNDASHSDLSNGDSALGPA
DPDDDDEEEADTSMAMDTDSNMDEEGGDESQDGPFPSPGPVCLATSAVLRAASAPCSPSH
ARPAPGPGRSPGAAPSSGLDCVISFQMATARPSSLPASSPKSLTYNNLANGTNGVASCPV
ERQELGMHTDKVCPVTVHPVAICPSAPKNNLKEEDKMEDSSPLLDQLVPDYAVQLERSGD
ASQVRVQVLSSSNDCTLKKNAEILASLAQAESVHVNGNDKSDDLSVKKEKLSQNLLQWTV
ADVASYFADAGFPEQALAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHIKVLQ
RSHFLECDDL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccaagtaccgcgagtggatactggacactatcgactctctgcggtcgcga
aaagcccgaccagacttggagcgaatctgccgaatggtccggcggcgtcacgggtgcgag
cccgaccaaacgtgcggcgagctggagaagctcatacgcgagcagacggtgctgaaagtc
aactacaagggctccatttcgtaccggaacgccgccaaggttcagaggaggtgccgcaaa
aaggacgacgccgtgacggcgtcttctgcagcggcggcggtaacggcgacgtctgtggcg
gccgtaaacgacgccagtcactcggacttgagcaacggggatagcgcgctcggccccgcg
gacccggacgacgacgatgaggaggaggccgacacctccatggccatggacacagatagc
aatatggacgaagaagggggcgacgagagccaggatggacccttcccctcaccgggcccc
gtgtgcttggccacgtcggcggtattgcgagcagcgtccgccccctgctcgccctctcac
gctcgtcccgctcccggcccgggtcgcagtcctggtgcggccccaagctccggtctggat
tgcgtcatctccttccaaatggctaccgcaaggcccagctccctgcccgcttccagccca
aagtccctcacatacaacaacttggccaacgggaccaatggtgtcgccagctgcccggtg
gagcgccaggagcttggaatgcacacagataaagtatgtccagtgacagtccaccccgta
gccatctgcccgagcgctcccaagaacaacctgaaggaggaggacaagatggaggacagc
agccccctcttggaccaactggtacccgactacgccgtgcaactggagaggagcggagat
gcgtcccaggttagagtgcaggtgctgtcatcgtcgaacgactgcactctaaagaagaac
gcggaaatactcgcctccttggcacaagccgaaagcgtccacgtgaacggcaacgataaa
agcgacgacctctcggtgaagaaagagaagttgagtcaaaacttgctgcagtggacggtg
gccgacgtggccagttactttgccgatgctggctttccagagcaagccctggccttcagg
acgcaggagatcgacggcaagtcgctgctgctcatgcaacgcagcgacgttctgaccggc
ctctccatccgactggggcccgcgctgaaaatctacgagcgccacatcaaggtgctgcaa
aggagccacttcctggagtgcgacgacctctga
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